RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TYROBPO43914 113 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PRAMEF11O60813 436 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 C9orf152Q5JTZ5 239 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ANXA8L1Q5VT79 327 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 GTF2IRD2BQ6EKJ0 949 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ARL9Q6T311 187 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 GTF2IRD2Q86UP8 949 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PARP16Q8N5Y8 322 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SUMF2Q8NBJ7 301 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SELENOMQ8WWX9 145 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 USP7Q93009 1102 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TMEM41AQ96HV5 264 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PPP1R16AQ96I34 528 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CERS4Q9HA82 394 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 DNAJC27Q9NZQ0 273 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 FCF1Q9Y324 198 aaKnown RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 PCDHB3Q9Y5E6 796 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TCRBV5S1A1TA0A578 114 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 RHOP08100 348 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ALPIP09923 528 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 MRPS10P82664 201 aaKnown RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 TARDBPQ13148 414 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHD6-203ENST00000373233 TMCO2Q7Z6W1 182 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 OR10G2Q8NGC3 310 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 OLIG1Q8TAK6 271 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TMEM80Q96HE8 168 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 GATA5Q9BWX5 397 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 B3GNT4Q9C0J1 378 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ARL15Q9NXU5 204 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TNFRSF10DQ9UBN6 386 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TCAPO15273 167 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 COCHO43405 550 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZNF821O75541 412 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 BMP2P12643 396 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CHRNA4P43681 627 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 GK3PQ14409 553 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 KIAA1161Q6NSJ0 714 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 OR6S1Q8NH40 331 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 BADQ92934 168 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 RTP4Q96DX8 246 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 MYRFLQ96LU7 910 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 HIPK2Q9H2X6 1198 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 DUS2Q9NX74 493 aaKnown RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 HPGDP15428 266 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PRKXP51817 358 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZNF33AQ06730 810 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 DSC1Q08554 894 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 DCST1Q5T197 706 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ALKAL2Q6UX46 152 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 NRARPQ7Z6K4 114 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 LGI4Q8N135 537 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 FSTL5Q8N475 847 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 CHDHQ8NE62 594 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 SH3RF2Q8TEC5 729 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PKMYT1Q99640 499 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 NUDT9Q9BW91 350 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 HCSTQ9UBK5 93 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PLEKHM1Q9Y4G2 1056 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZNF840PA6NDX5 716 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CNTN5O94779 1100 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CACNG1Q06432 222 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZNF155Q12901 538 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 NFATC4Q14934 902 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 RFTN2Q52LD8 501 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 TSTD2Q5T7W7 516 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CES5AQ6NT32 575 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ANKLE1Q8NAG6 615 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 FCAMRQ8WWV6 532 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZCCHC2Q9C0B9 1178 aaKnown RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 MRPS30Q9NP92 439 aaKnown RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 TVP23BQ9NYZ1 205 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 DOCK6Q96HP0 2047 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 C20orf202A1L168 122 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CAPN14A8MX76 684 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 MC4RP32245 332 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 UGT2B10P36537 528 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZNF551Q7Z340 670 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 OR5T1Q8NG75 326 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SLC13A3Q8WWT9 602 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PRR11Q96HE9 360 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 C1orf74Q96LT6 269 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 HEBP1Q9NRV9 189 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ZIM2Q9NZV7 527 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 PCDHB9Q9Y5E1 797 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ACTA2P62736 377 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ACTG2P63267 376 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ACTC1P68032 377 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ACTA1P68133 377 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 MAP4K2Q12851 820 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SIRPB2Q5JXA9 342 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 KIAA0930Q6ICG6 404 aaPredicted RBP6.3□□□□□ -1.4
CHD6-203ENST00000373233 RASGRP3Q8IV61 690 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 ENTHD1Q8IYW4 607 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SLC38A6Q8IZM9 456 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 OR6M1Q8NGM8 313 aa6.3□□□□□ -1.4
CHD6-203ENST00000373233 SARDHQ9UL12 918 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms