RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 A4GNTQ9UNA3 340 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 COLEC10Q9Y6Z7 277 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 FAAHO00519 579 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 EPPINO95925 133 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 OSMP13725 252 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 ATP1A4Q13733 1029 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 KRT73Q86Y46 540 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 SLC7A13Q8TCU3 470 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 SNRNP27Q8WVK2 155 aaKnown RBP17.67■□□□□ 0.42
USP49-202ENST00000373010 ZHX1-C8orf76Q96EF9 292 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 VMP1Q96GC9 406 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 MCOLN1Q9GZU1 580 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 PALMDQ9NP74 551 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 FAIMQ9NVQ4 179 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 ZNF624Q9P2J8 865 aaPredicted RBP17.67■□□□□ 0.42
USP49-202ENST00000373010 ACAD8Q9UKU7 415 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 ENTPD4Q9Y227 616 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 HEBP2Q9Y5Z4 205 aa17.67■□□□□ 0.42
USP49-202ENST00000373010 AIREO43918 545 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 CTHP32929 405 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 GRK5P34947 590 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 BTN3A2P78410 334 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 ZNF846Q147U1 533 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 SLC48A1Q6P1K1 146 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 PGBD2Q6P3X8 592 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 WDR53Q7Z5U6 358 aaPredicted RBP17.66■□□□□ 0.42
USP49-202ENST00000373010 DRAXINQ8NBI3 349 aaPredicted RBP17.66■□□□□ 0.42
USP49-202ENST00000373010 FUZQ9BT04 418 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 SARGQ9BW04 601 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 QRSL1Q9H0R6 528 aaKnown RBP17.66■□□□□ 0.42
USP49-202ENST00000373010 ZBTB20Q9HC78 741 aaPredicted RBP17.66■□□□□ 0.42
USP49-202ENST00000373010 SNX7Q9UNH6 387 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 MGAT4BQ9UQ53 548 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 GUCY1B2O75343 617 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 F3P13726 295 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 CLK1P49759 484 aaKnown RBP17.66■□□□□ 0.42
USP49-202ENST00000373010 PSMD7P51665 324 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 IRF3Q14653 427 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 TMEM64Q6YI46 380 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 DCDC5Q6ZRR9 648 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 VN1R4Q7Z5H5 301 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 TRIM73Q86UV7 250 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 FAM46DQ8NEK8 389 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 EQTNQ9NQ60 294 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 CTPS2Q9NRF8 586 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 CLN6Q9NWW5 311 aa17.66■□□□□ 0.42
USP49-202ENST00000373010 TLR4O00206 839 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 PROM1O43490 865 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 UGT2B17O75795 530 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 OXSR1O95747 527 aaPredicted RBP17.65■□□□□ 0.42
USP49-202ENST00000373010 ZNF12P17014 697 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 CSNK2A2P19784 350 aaPredicted RBP17.65■□□□□ 0.42
USP49-202ENST00000373010 UGT2B15P54855 530 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 TFF2Q03403 129 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 TARDBPQ13148 414 aaKnown RBP eCLIP17.65■□□□□ 0.42
USP49-202ENST00000373010 GPAT3Q53EU6 434 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 PODNL1Q6PEZ8 512 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 SLC46A3Q7Z3Q1 461 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 PAQR7Q86WK9 346 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 CENPSQ8N2Z9 138 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 OR9A2Q8NGT5 310 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 BBS10Q8TAM1 723 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 SFXN5Q8TD22 340 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 ROGDIQ9GZN7 287 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 HMG20AQ9NP66 347 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 ERGIC3Q9Y282 383 aa17.65■□□□□ 0.42
USP49-202ENST00000373010 H3BN98 237 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 ENTPD6O75354 484 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 BUD31P41223 144 aaPredicted RBP17.64■□□□□ 0.42
USP49-202ENST00000373010 MC3RP41968 323 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 SERPINB10P48595 397 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 KIAA1024LP59773 190 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 LSM11P83369 360 aaKnown RBP eCLIP17.64■□□□□ 0.42
USP49-202ENST00000373010 OR6T1Q8NGN1 323 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 OR6Q1Q8NGQ2 317 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 SLIRPQ9GZT3 109 aaKnown RBP17.64■□□□□ 0.42
USP49-202ENST00000373010 POLR2J3Q9H1A7 115 aaKnown RBP17.64■□□□□ 0.42
USP49-202ENST00000373010 DCSTAMPQ9H295 470 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 OR6C2Q9NZP2 312 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 OSGIN1Q9UJX0 560 aa17.64■□□□□ 0.42
USP49-202ENST00000373010 ZW10O43264 779 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 SULT1C4O75897 302 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 FHP07954 510 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 HSMCR30P0CW71 290 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 BMP4P12644 408 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 ACSL1P33121 698 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 ACTR1BP42025 376 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 XKP51811 444 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 ACTR1AP61163 376 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 ILKQ13418 452 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 NFATC4Q14934 902 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 LTB4RQ15722 352 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 SOWAHCQ53LP3 525 aaPredicted RBP17.64■□□□□ 0.41
USP49-202ENST00000373010 ARMCX4Q5H9R4 360 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 KIAA1324Q6UXG2 1013 aaKnown RBP17.64■□□□□ 0.41
USP49-202ENST00000373010 SNX29P2Q8IUI4 249 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 SRFBP1Q8NEF9 429 aaKnown RBP17.64■□□□□ 0.41
USP49-202ENST00000373010 KAT2AQ92830 837 aa17.64■□□□□ 0.41
USP49-202ENST00000373010 BMFQ96LC9 184 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms