RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 ZNF658BQ4V348 819 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 OR4K5Q8NGD3 323 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 AP2M1Q96CW1 435 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 ZC3HAV1LQ96H79 300 aaKnown RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 ZNF607Q96SK3 696 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 TREX2Q9BQ50 279 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SOSTQ9BQB4 213 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 GPSM3Q9Y4H4 160 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 A0A1W2PRQ8 180 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 TMEM129A0AVI4 362 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 P2RX3P56373 397 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 CD300LDQ6UXZ3 194 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 IQCHQ86VS3 1027 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SNAPC3Q92966 411 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 NFKBIL1Q9UBC1 381 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 NLKQ9UBE8 527 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 GSTK1Q9Y2Q3 226 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 PLXNA2O75051 1894 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 PLPP1O14494 284 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 CASKO14936 926 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 PDPK1O15530 556 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 PROM1O43490 865 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 ACP2P11117 423 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 CD79BP40259 229 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 CDK5Q00535 292 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 CNTN1Q12860 1018 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SYPL1Q16563 259 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 TMEM163Q8TC26 289 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 FNDC11Q9BVV2 318 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SERHL2Q9H4I8 314 aa17.09■□□□□ 0.33
HNF4A-203ENST00000372920 SIRT3Q9NTG7 399 aaPredicted RBP17.09■□□□□ 0.33
HNF4A-203ENST00000372920 PRAMEF27A3QJZ7 478 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 FAM157BP0CG42 384 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 GABRA5P31644 462 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 MAPK12P53778 367 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 TNK1Q13470 666 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 TYW3Q6IPR3 259 aaKnown RBP17.08■□□□□ 0.33
HNF4A-203ENST00000372920 MZT2BQ6NZ67 158 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 SHFQ7M4L6 423 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 MEX3DQ86XN8 651 aaKnown RBP17.08■□□□□ 0.33
HNF4A-203ENST00000372920 PLCZ1Q86YW0 608 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 DUSP18Q8NEJ0 188 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 UPRTQ96BW1 309 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 PLA2G12AQ9BZM1 189 aa17.08■□□□□ 0.33
HNF4A-203ENST00000372920 FGF20Q9NP95 211 aaPredicted RBP17.08■□□□□ 0.33
HNF4A-203ENST00000372920 NEDD8-MDP1E9PL57 170 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 CACNB4O00305 520 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 ARHGEF9O43307 516 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 AKR7A2O43488 359 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 C1QBP02746 253 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 OR12D1P0DN82 309 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 ACADMP11310 421 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 RAB40BQ12829 278 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 SPOUT1Q5T280 376 aaKnown RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TM4SF18Q96CE8 201 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 SCLYQ96I15 445 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 CITED4Q96RK1 184 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 NIPAL2Q9H841 368 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 MAN2C1Q9NTJ4 1040 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 GPR52Q9Y2T5 361 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 DNMT3AQ9Y6K1 912 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TRIM3O75382 744 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 PRKAR1AP10644 381 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 FGF9P31371 208 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 SNRPD2P62316 118 aaKnown RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 NFE2L1Q14494 772 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 OLIG3Q7RTU3 272 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TBC1D19Q8N5T2 526 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 ZNF557Q8N988 423 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 SMPDL3AQ92484 453 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 SLC9A6Q92581 669 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 UBE2E3Q969T4 207 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 IL17FQ96PD4 163 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 ZNF717Q9BY31 904 aaPredicted RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 MTG2Q9H4K7 406 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 MRPS18AQ9NVS2 196 aaKnown RBP17.08■□□□□ 0.32
HNF4A-203ENST00000372920 DKK3Q9UBP4 350 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 PCDHGB7Q9Y5F8 929 aa17.08■□□□□ 0.32
HNF4A-203ENST00000372920 A0A1W2PRU2 124 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 PRODHO43272 600 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 LYRM1O43325 122 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 NCR1O76036 304 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 TBX6O95947 436 aaPredicted RBP17.07■□□□□ 0.32
HNF4A-203ENST00000372920 XPAP23025 273 aaPredicted RBP17.07■□□□□ 0.32
HNF4A-203ENST00000372920 SMSP52788 366 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 TLE2Q04725 743 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 IL18Q14116 193 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 NDUFA9Q16795 377 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 BTBD16Q32M84 506 aa17.07■□□□□ 0.32
HNF4A-203ENST00000372920 HMGN2P46Q86SG4 172 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms