RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 BCL7BQ9BQE9 202 aa13.29□□□□□ -0.28
LDB3-204ENST00000372066 RTCAO00442 366 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 SLC31A1O15431 190 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 MITFO75030 526 aaPredicted RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 SNRNP200O75643 2136 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 DIRAS1O95057 198 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 HNRNPA2B1P22626 353 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 NPRL3Q12980 569 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SLC9A5Q14940 896 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 RTP5Q14D33 572 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 NEDD8Q15843 81 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SPDYE7PQ495Y7 208 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 ANKRD34AQ69YU3 496 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 ZNF425Q6IV72 752 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 BHLHB9Q6PI77 547 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 OR2L5Q8NG80 312 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 OR4C15Q8NGM1 316 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 RAB2BQ8WUD1 216 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 HRASLS5Q96KN8 279 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 NODALQ96S42 347 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 BARD1Q99728 777 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 MYOCQ99972 504 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 FGF22Q9HCT0 170 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SLC6A20Q9NP91 592 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SIRT3Q9NTG7 399 aaPredicted RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 EXD2Q9NVH0 621 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 FAM32AQ9Y421 112 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 SNX8Q9Y5X2 465 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 ENPP4Q9Y6X5 453 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 TMEM131Q92545 1883 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SIGLEC6O43699 453 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 IFNW1P05000 195 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 RHCEP18577 417 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 PCSK6P29122 969 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 BCL6P41182 706 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 XCR1P46094 333 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 HMGA2P52926 109 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 STXBP1P61764 594 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 YPEL5P62699 121 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 E2F1Q01094 437 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SPIBQ01892 262 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 MVKQ03426 396 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 XAF1Q6GPH4 301 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 FAM92BQ6ZTR7 304 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SVOPQ8N4V2 548 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 IPCEF1Q8WWN9 437 aaPredicted RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 MUL1Q969V5 352 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 ZNF607Q96SK3 696 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 PIP5K1AQ99755 562 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SLAMF7Q9NQ25 335 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 SEMA3GQ9NS98 782 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 LYARQ9NX58 379 aaKnown RBP13.28□□□□□ -0.28
LDB3-204ENST00000372066 ANKMY1Q9P2S6 941 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
LDB3-204ENST00000372066 CCDC88CQ9P219 2028 aa13.27□□□□□ -0.28
LDB3-204ENST00000372066 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 HAT1O14929 419 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 OPN1SWP03999 348 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 THEGLP0DJG4 465 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 ACP1P24666 158 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 KHKP50053 298 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 RPS15AP62244 130 aaKnown RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 DAB2P98082 770 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 INSM1Q01101 510 aaPredicted RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 IL1RL1Q01638 556 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 GNA13Q14344 377 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 MAD2L1BPQ15013 274 aaPredicted RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 MICAQ29983 383 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 NDUFAF5Q5TEU4 345 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 GPR107Q5VW38 600 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 GTF2IRD2BQ6EKJ0 949 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 MRM1Q6IN84 353 aaKnown RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 C6orf120Q7Z4R8 191 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 ZNF605Q86T29 641 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 GTF2IRD2Q86UP8 949 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 AMIGO1Q86WK6 493 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 MMP21Q8N119 569 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 CACTIN-AS1Q8N1I8 211 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 ZFPM2Q8WW38 1151 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 FGF11Q92914 225 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 EXOSC8Q96B26 276 aaKnown RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 MS4A6EQ96DS6 147 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 TEFMQ96QE5 360 aaKnown RBP13.27□□□□□ -0.29
LDB3-204ENST00000372066 DPH7Q9BTV6 452 aa13.27□□□□□ -0.29
LDB3-204ENST00000372066 ROGDIQ9GZN7 287 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms