RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MPZL2O60487 215 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 IFNA6P05013 189 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 MMP2P08253 660 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 AOAHP28039 575 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 DNASE1L1P49184 302 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 AKR1D1P51857 326 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 SCGB2B2Q4G0G5 96 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 LIN54Q6MZP7 749 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 AMIGO1Q86WK6 493 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 CNTN4Q8IWV2 1026 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 SPARTQ8N0X7 666 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 YIPF7Q8N8F6 280 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 NEIL3Q8TAT5 605 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ECHDC3Q96DC8 303 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 OR2M4Q96R27 311 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 NMNAT1Q9HAN9 279 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 COMMD9Q9P000 198 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ERVK-11Q9UQG0 969 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 C1SP09871 688 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ZNF26P17031 533 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 CXCR1P25024 350 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 PIGAP37287 484 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 CEBPGP53567 150 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 SLC27A4Q6P1M0 643 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 TMEM80Q96HE8 168 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 NPLQ9BXD5 320 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ANKRD60Q9BZ19 345 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 KATNBL1Q9H079 304 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 PLAC1Q9HBJ0 212 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 NECTIN3Q9NQS3 549 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 ANKMY1Q9P2S6 941 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 PTBP2Q9UKA9 531 aaKnown RBP8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 POU2F3Q9UKI9 436 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 SATB2Q9UPW6 733 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 LCTP09848 1927 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 DOCK3Q8IZD9 2030 aa8.65□□□□□ -1.02
SMARCA1-202ENST00000371122 TCRBV3S1A0A5B6 114 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 SAGE2PA6NJ88 616 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 CTDSP2O14595 271 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 ACOT8O14734 319 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 SBK3P0C264 359 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 DRD5P21918 477 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 UQCRC2P22695 453 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 MYF6P23409 242 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 STAT5AP42229 794 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 GRIA2P42262 883 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 PIK3CBP42338 1070 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC6A9P48067 706 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 INHBCP55103 352 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 PON3Q15166 354 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 COX20Q5RI15 118 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF517Q6ZMY9 492 aaPredicted RBP8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 OR8H3Q8N146 312 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 PDPRQ8NCN5 879 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM174Q8WUU8 243 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF597Q96LX8 424 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 PRRG4Q9BZD6 226 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF224Q9NZL3 707 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 CA14Q9ULX7 337 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 MAN2B2Q9Y2E5 1009 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 MGAMO43451 1857 aa8.65□□□□□ -1.03
SMARCA1-202ENST00000371122 CLK3P49761 638 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 PHC1P78364 1004 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 EMX1Q04741 257 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 MYBPC3Q14896 1274 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 SPCS2Q15005 226 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 EXOSC7Q15024 291 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 IRAK1BP1Q5VVH5 260 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC25A24Q6NUK1 477 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 ATCAYQ86WG3 371 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 ZSWIM9Q86XI8 627 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 METTL25Q8N6Q8 603 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 OR6N2Q8NGY6 317 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 DNAJB8Q8NHS0 232 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 ASB11Q8WXH4 323 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC22A18Q96BI1 424 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 EFHD2Q96C19 240 aaPredicted RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 DPH1Q9BZG8 443 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 IKZF5Q9H5V7 419 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM185BQ9H7F4 350 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 DCAF13Q9NV06 445 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 OLAHQ9NV23 265 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 COQ3Q9NZJ6 369 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 UNC13CQ8NB66 2214 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 LAMA2P24043 3122 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 A0A1W2PRQ8 180 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 ANTXRLA6NF34 631 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 AREL1O15033 823 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC16A5O15375 505 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 AKAP8O43823 692 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 PLATP00750 562 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF823P16415 610 aa8.64□□□□□ -1.03
SMARCA1-202ENST00000371122 HMGA1P17096 107 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms