RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CEBPEQ15744 281 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF628Q5EBL2 1059 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 OGFOD2Q6N063 350 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 TUBA3EQ6PEY2 450 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 FAM111BQ6SJ93 734 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM156Q8N614 296 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 NUBPLQ8TB37 319 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF675Q8TD23 568 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 KAT2AQ92830 837 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 CIDECQ96AQ7 238 aaPredicted RBP13.77□□□□□ -0.21
COL9A1-204ENST00000370496 WWTR1Q9GZV5 400 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 OR10A5Q9H207 317 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 LIN28AQ9H9Z2 209 aaKnown RBP13.77□□□□□ -0.21
COL9A1-204ENST00000370496 ATAD3AQ9NVI7 634 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 BCAP29Q9UHQ4 241 aa13.77□□□□□ -0.21
COL9A1-204ENST00000370496 TRAV17A0A0B4J275 112 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 MYO1GB0I1T2 1018 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 B8ZZF3 427 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 PRPS1L1P21108 318 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 GPC1P35052 558 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 TNFSF10P50591 281 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 C19orf57Q0VDD7 668 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 FUT7Q11130 342 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 MAP4K2Q12851 820 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 HSPB3Q12988 150 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 EXOSC7Q15024 291 aaKnown RBP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 OR1C1Q15619 314 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 SLC9B1Q4ZJI4 515 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF385BQ569K4 471 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM107Q6UX40 140 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 C16orf47Q6ZP98 133 aaPredicted RBP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 RGS9BPQ6ZS82 235 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 Q6ZS92 163 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 ACAD11Q709F0 780 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 LARP4Q71RC2 724 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 MAVSQ7Z434 540 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 ARMC10Q8N2F6 343 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 HORMAD2Q8N7B1 307 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 HAS2Q92819 552 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 ZBED6CLQ96FA7 236 aaPredicted RBP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 AMDHD1Q96NU7 426 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 PRPF18Q99633 342 aaKnown RBP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 MAPRE3Q9UPY8 281 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 CFL2Q9Y281 166 aa13.76□□□□□ -0.21
COL9A1-204ENST00000370496 YARS2Q9Y2Z4 477 aaKnown RBP13.76□□□□□ -0.21
COL9A1-204ENST00000370496 C2orf92A0A1B0GVN3 265 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 TCP11X1B4DZS4 312 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 POLR3GO15318 223 aaPredicted RBP13.75□□□□□ -0.21
COL9A1-204ENST00000370496 TBX19O60806 448 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 SLITRK5O94991 958 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 CLPSP04118 112 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 MC3RP41968 323 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 CYB561P49447 251 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 MGAT2Q10469 447 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 PRSS53Q2L4Q9 553 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 CPTPQ5TA50 214 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 SPATA19Q7Z5L4 167 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 CATSPER1Q8NEC5 780 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 OR7A2PQ8NGA2 310 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 OR52R1Q8NGF1 315 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 ERP27Q96DN0 273 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 C5orf34Q96MH7 638 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 RASL10BQ96S79 203 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 DPY30Q9C005 99 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 GLIPR2Q9H4G4 154 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 DDX18Q9NVP1 670 aaKnown RBP13.75□□□□□ -0.21
COL9A1-204ENST00000370496 LRFN1Q9P244 771 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 ATP6V1HQ9UI12 483 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
COL9A1-204ENST00000370496 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM200CA6NKL6 621 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 A8MVJ9 347 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 SLC28A2O43868 658 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 COQ9O75208 318 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 BCAS2O75934 225 aaPredicted RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 CBX7O95931 251 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 ALDOCP09972 364 aaKnown RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 TRHRP34981 398 aaPredicted RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 CD96P40200 585 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 HLCSP50747 726 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 MANFP55145 182 aaKnown RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF155Q12901 538 aaPredicted RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 TRMT12Q53H54 448 aaKnown RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 SZRD1Q7Z422 152 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 TAGAPQ8N103 731 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF615Q8N8J6 731 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 OR7G2Q8NG99 324 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 C16orf52Q8NHV5 167 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 ACTRT2Q8TDY3 377 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM125Q96AQ2 219 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms