RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 HSD11B2P80365 405 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 RFX4Q33E94 735 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 ZC3H12BQ5HYM0 836 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 TSEN54Q7Z6J9 526 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 PIP4P1Q86T03 277 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 ASPGQ86U10 573 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NATD1Q8N6N6 113 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 UCN3Q969E3 161 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 TAMM41Q96BW9 452 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NMD3Q96D46 503 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 TM4SF19Q96DZ7 209 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 C17orf62Q9BQA9 187 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NLNQ9BYT8 704 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 PADI2Q9Y2J8 665 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 PCDHGA8Q9Y5G5 932 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 SNX8Q9Y5X2 465 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 COMMD3-BMI1R4GMX3 469 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 LOC100130705A0A1B0GUX0 176 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 MITFO75030 526 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 SSR2P43308 183 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 GABRA4P48169 554 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 DAPP51397 102 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 MANFP55145 182 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 TRA2BP62995 288 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 CDK6Q00534 326 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 ADPRMQ3LIE5 342 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 TMEM35AQ53FP2 167 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 SAXO2Q658L1 398 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 ARHGAP22Q7Z5H3 698 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 MCATQ8IVS2 390 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 CARFQ8N187 725 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 RERGQ96A58 199 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NEURL3Q96EH8 262 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NRBF2Q96F24 287 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 SLC41A2Q96JW4 573 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 CCDC74BQ96LY2 380 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 CDC6Q99741 560 aa16.29■□□□□ 0.2
UBE3D-203ENST00000369747 SAMHD1Q9Y3Z3 626 aaKnown RBP16.29■□□□□ 0.2
UBE3D-203ENST00000369747 NINQ8N4C6 2090 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 CCDC160A6NGH7 325 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 SLC16A6O15403 523 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 IGFBP5P24593 272 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 GSTM2P28161 218 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 POLR2IP36954 125 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 HLCSP50747 726 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ARHGDIAP52565 204 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 RAD23AP54725 363 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 PCBP3P57721 371 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ELOAQ14241 798 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 KDM4DQ6B0I6 523 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 SLITRK4Q8IW52 837 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ZC3H7AQ8IWR0 971 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 KLHL6Q8WZ60 621 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 MS4A6EQ96DS6 147 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ING2Q9H160 280 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ZNF768Q9H5H4 540 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 PAPOLBQ9NRJ5 636 aaKnown RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 SIRT3Q9NTG7 399 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-203ENST00000369747 ORC6Q9Y5N6 252 aa16.28■□□□□ 0.2
UBE3D-203ENST00000369747 TOX3O15405 576 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-203ENST00000369747 SLC35G6P0C7Q6 338 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 ITGAMP11215 1152 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 FOLR1P15328 257 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 CDH2P19022 906 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-203ENST00000369747 ARL4DP49703 201 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 PDX1P52945 283 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 DSTNP60981 165 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 GPR19Q15760 415 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 CRB2Q5IJ48 1285 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 GALNT15Q8N3T1 639 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 D2HGDHQ8N465 521 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 PIK3C3Q8NEB9 887 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 CHRNA10Q9GZZ6 450 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 REEP1Q9H902 201 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 NEUROD4Q9HD90 331 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 TAS2R7Q9NYW3 318 aa16.27■□□□□ 0.2
UBE3D-203ENST00000369747 SCN3AQ9NY46 2000 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 CNOT1A5YKK6 2376 aaKnown RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 M0QX08 132 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 B4GALT2O60909 372 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 DDX5P17844 614 aaKnown RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 TNFRSF1BP20333 461 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 CLDN6P56747 220 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 RAB8AP61006 207 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 HSPB3Q12988 150 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 TRIP6Q15654 476 aaKnown RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 CTU2Q2VPK5 515 aaKnown RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 PHF19Q5T6S3 580 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 NDUFAF5Q5TEU4 345 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF691Q5VV52 312 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 ABHD17CQ6PCB6 329 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 GALNT5Q7Z7M9 940 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 CSNK1A1LQ8N752 337 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 CHDHQ8NE62 594 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms