RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 MSRB3Q8IXL7 192 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 ZNF304Q9HCX3 659 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 MS4A12Q9NXJ0 267 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 NLGN3Q9NZ94 848 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
SEMA6C-204ENST00000368914 C17orf105B2RV13 164 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 IFNW1P05000 195 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 FHP07954 510 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ALOX5P09917 674 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 CBLP22681 906 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RRM2P31350 389 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ATP6V1E1P36543 226 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RAPSNQ13702 412 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 C10orf62Q5T681 223 aaPredicted RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 REEP3Q6NUK4 255 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 B3GNT8Q7Z7M8 397 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 LILRA2Q8N149 483 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 OR8J2Q8NGG1 315 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 SLC29A1Q99808 456 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 TNFRSF11BO00300 401 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RNASET2O00584 256 aaKnown RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RAP2AP10114 183 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 CCL4P13236 92 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 DUSP3P51452 185 aaPredicted RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ZNF425Q6IV72 752 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 IQCHQ86VS3 1027 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 DHRSXQ8N5I4 330 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 OR52R1Q8NGF1 315 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 NAT6Q93015 286 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 NCOR2Q9Y618 2525 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 J3KTA2 159 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 PGM3O95394 542 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 OTX2P32243 289 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 TCTE1Q5JU00 501 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ANKRD34AQ69YU3 496 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 IL22RA1Q8N6P7 574 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 PYURFQ96I23 114 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 CPPED1Q9BRF8 314 aaPredicted RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 IL20RAQ9UHF4 553 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 SLC9A8Q9Y2E8 581 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 TOR1BO14657 336 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 SOX14O95416 240 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 H6PDO95479 791 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 GKN3PP0CG01 181 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 SP9P0CG40 484 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 FCGR1AP12314 374 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 ERICH5Q6P6B1 374 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 VWA5B2Q8N398 1253 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 DNASE2BQ8WZ79 361 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 C9orf16Q9BUW7 83 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 SERHLQ9NQF3 203 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 RPS6KB2Q9UBS0 482 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 AASSQ9UDR5 926 aa13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 WARS2Q9UGM6 360 aaKnown RBP13.39□□□□□ -0.27
SEMA6C-204ENST00000368914 EMC8O43402 210 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 KCNK5O95279 499 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 GPR75O95800 540 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 KHKP50053 298 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 WNT3P56703 355 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 XKR5Q6UX68 686 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 LAPTM4BQ86VI4 370 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 CENPNQ96H22 339 aaPredicted RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 CCDC74BQ96LY2 380 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 CRB3Q9BUF7 120 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 DDX31Q9H8H2 851 aaKnown RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 SLC39A1Q9NY26 324 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 CTSFQ9UBX1 484 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PILRBQ9UKJ0 227 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 NUP210Q8TEM1 1887 aaPredicted RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PIEZO2Q9H5I5 2752 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 AQP12BA6NM10 295 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 AP3D1O14617 1153 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PROM1O43490 865 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 GPIP06744 558 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 GGT1P19440 569 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 HTR1EP28566 365 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 IFI44LQ53G44 452 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 PLEKHM3Q6ZWE6 761 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 AQP12AQ8IXF9 295 aa13.38□□□□□ -0.27
SEMA6C-204ENST00000368914 DPP10Q8N608 796 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms