RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 PNLIPRP1P54315 467 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 EPHA4P54764 986 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 EFNB1P98172 346 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 COX10Q12887 443 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 PUM1Q14671 1186 aaKnown RBP eCLIP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CYP27C1Q4G0S4 372 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 PLEKHS1Q5SXH7 462 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CXorf57Q6NSI4 855 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 TPGS1Q6ZTW0 290 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 TIGD4Q8IY51 512 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ARIH2OSQ8N7S6 290 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 SLC43A3Q8NBI5 491 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 OR7G3Q8NG95 312 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 RBPMSQ93062 196 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 OTULINQ96BN8 352 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 SENP5Q96HI0 755 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 WRAP53Q9BUR4 548 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 SEMA3GQ9NS98 782 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 RHCGQ9UBD6 479 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ACAD8Q9UKU7 415 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CBLCQ9ULV8 474 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 RWDD3Q9Y3V2 267 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 NUBP2Q9Y5Y2 271 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CIB4A0PJX0 185 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 KHNYNO15037 678 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 AKAP8O43823 692 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 LZTS3O60299 673 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 OR10H3O60404 316 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ZNF8P17098 575 aaPredicted RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 DDCP20711 480 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 AVPR1BP47901 424 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CAV3P56539 151 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 RAB14P61106 215 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ACSM1Q08AH1 577 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ZNF763Q0D2J5 394 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 DOC2AQ14183 400 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 REEP3Q6NUK4 255 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 LINC00471Q8N535 108 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 RFT1Q96AA3 541 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 PLD4Q96BZ4 506 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 MTERF1Q99551 399 aaKnown RBP9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 EVA1BQ9NVM1 165 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 ASB6Q9NWX5 421 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 TVP23BQ9NYZ1 205 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 KIF25Q9UIL4 384 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 CCDC88CQ9P219 2028 aa9.97□□□□□ -0.81
LYSMD1-201ENST00000368908 A0A1W2PQ45 241 aaPredicted RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 A0A1W2PQY0 241 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 SMIM30A4D0T7 59 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ATP6V1G2-DDX39BF2Z307 99 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 PRODHO43272 600 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 TLX2O43763 284 aaPredicted RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 HLA-DPB1P04440 258 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 IFNA16P05015 189 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ASGR1P07306 291 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 BTCP35070 178 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 CHI3L1P36222 383 aaPredicted RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 DGKEP52429 567 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 RAG2P55895 527 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 DSTNP60981 165 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 MADCAM1Q13477 382 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 DDX39BQ13838 428 aaKnown RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 SNAPC1Q16533 368 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 UNC5DQ6UXZ4 953 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 RTL4Q6ZR62 310 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 USP45Q70EL2 814 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 C16orf62Q7Z3J2 963 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 BCDIN3DQ7Z5W3 292 aaKnown RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ADGRD2Q7Z7M1 963 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ASPGQ86U10 573 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 OR11H4Q8NGC9 324 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 CLP1Q92989 425 aaKnown RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 PDXPQ96GD0 296 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 PKP4Q99569 1192 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 RNF32Q9H0A6 362 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 HDHD2Q9H0R4 259 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 OR51J1Q9H342 316 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ERVMER34-1Q9H9K5 563 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 ZNF222Q9UK12 451 aa9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 FBXO9Q9UK97 447 aaPredicted RBP9.96□□□□□ -0.81
LYSMD1-201ENST00000368908 MTMR11A4FU01 709 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 CASC3O15234 703 aaKnown RBP9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 PSIP1O75475 530 aaKnown RBP9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 ETHE1O95571 254 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 FURINP09958 794 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 RBMS1P29558 406 aaKnown RBP9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 SGSHP51688 502 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 CTBP2P56545 445 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 CDK5Q00535 292 aa9.96□□□□□ -0.82
LYSMD1-201ENST00000368908 B4GALNT1Q00973 533 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms