RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 QRFPRQ96P65 431 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 OR52E6Q96RD3 313 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 PRPF18Q99633 342 aaKnown RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 LRRC61Q9BV99 259 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 TCEAL2Q9H3H9 227 aaPredicted RBP8.27□□□□□ -1.08
TPM3-213ENST00000368545 MUC13Q9H3R2 512 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 TM9SF3Q9HD45 589 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 SERHLQ9NQF3 203 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 CD300AQ9UGN4 299 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 SNX7Q9UNH6 387 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 AP3M1Q9Y2T2 418 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 L3MBTL1Q9Y468 752 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 ENTPD2Q9Y5L3 495 aa8.27□□□□□ -1.08
TPM3-213ENST00000368545 TDRD6O60522 2096 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 PCNX2A6NKB5 2137 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 ZFHX4Q86UP3 3567 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 GNG14A0A1W2PPG7 69 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 A0A1W2PR48 441 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 TLX3O43711 291 aaPredicted RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 BCAS2O75934 225 aaPredicted RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 PSMG1O95456 288 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 TGFB1P01137 390 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 WNT1P04628 370 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 ITGB2P05107 769 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 HSD17B1P14061 328 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 PEBP1P30086 187 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 AHRP35869 848 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 DGKQP52824 942 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 ARFIP1P53367 373 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 RAE1P78406 368 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 BNIP2Q12982 314 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 FLOT2Q14254 428 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 GPR18Q14330 331 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 KHDRBS2Q5VWX1 349 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 SLC2A7Q6PXP3 512 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 TEPPQ6URK8 271 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 IKBIPQ70UQ0 350 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 R3HCC1LQ7Z5L2 792 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 ADGRF3Q8IZF5 1079 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 ANKRD53Q8N9V6 530 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 TRPV3Q8NET8 790 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 OR8J3Q8NGG0 315 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 OR8J2Q8NGG1 315 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 DNASE2BQ8WZ79 361 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 GTF2H4Q92759 462 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 LRRC46Q96FV0 321 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 ITCHQ96J02 903 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 BARD1Q99728 777 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 NRTNQ99748 197 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 SLC39A3Q9BRY0 314 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 MS4A8Q9BY19 250 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 SMURF2Q9HAU4 748 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 IL1RL2Q9HB29 575 aa8.27□□□□□ -1.09
TPM3-213ENST00000368545 FAM120CQ9NX05 1096 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 WBP11Q9Y2W2 641 aaKnown RBP8.27□□□□□ -1.09
TPM3-213ENST00000368545 PRAMEF33A0A0G2JMD5 474 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 PRORSD1PA6NEY8 169 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NME4O00746 187 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SCAMP2O15127 329 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 OR1F1O43749 312 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 COX7A2P14406 83 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DDX5P17844 614 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 SOX8P57073 446 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 EEFSECP57772 596 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 HNRNPKP61978 463 aaKnown RBP eCLIP8.26□□□□□ -1.09
TPM3-213ENST00000368545 E2F1Q01094 437 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NFATC3Q12968 1075 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 IKZF1Q13422 519 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CAPRIN1Q14444 709 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 MDC1Q14676 2089 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 RCN1Q15293 331 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 MST1LQ2TV78 715 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 TMEM35AQ53FP2 167 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 C6orf10Q5SRN2 563 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DEPDC1Q5TB30 811 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ZNF425Q6IV72 752 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ZFP1Q6P2D0 407 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 FAM90A1Q86YD7 464 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SLC15A3Q8IY34 581 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 NAGSQ8N159 534 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 OR8H2Q8N162 312 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DEFB119Q8N690 84 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SLC37A2Q8TED4 501 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 TMEM125Q96AQ2 219 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CGREF1Q99674 301 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SH3GL1Q99961 368 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 DPH7Q9BTV6 452 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 BTBD2Q9BX70 525 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 CEP295Q9C0D2 2601 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 OR51B5Q9H339 312 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 MYNNQ9NPC7 610 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 STARD5Q9NSY2 213 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 ATAD3AQ9NVI7 634 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 SPHK1Q9NYA1 384 aa8.26□□□□□ -1.09
TPM3-213ENST00000368545 STX18Q9P2W9 335 aaKnown RBP8.26□□□□□ -1.09
TPM3-213ENST00000368545 SPASTQ9UBP0 616 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms