RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 RAB43Q86YS6 212 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 SHISA5Q8N114 240 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 NATD1Q8N6N6 113 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 FIBINQ8TAL6 211 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 GEMIN6Q8WXD5 167 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 TRIM43Q96BQ3 446 aaPredicted RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 C16orf58Q96GQ5 468 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 OPALINQ96PE5 141 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 RBM14Q96PK6 669 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 HDHD2Q9H0R4 259 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 MED20Q9H944 212 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 RPRD1BQ9NQG5 326 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 TAAR2Q9P1P5 351 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 SSR3Q9UNL2 185 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 KCNK6Q9Y257 313 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 SLC9A8Q9Y2E8 581 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 NOSIPQ9Y314 301 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 CSNK1G3Q9Y6M4 447 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TRPM6Q9BX84 2022 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TRAV6A0A075B6T7 132 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 C1orf226A1L170 272 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 PCP4L1A6NKN8 68 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 OR52A4PA6NMU1 304 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 H3BQ06 376 aaPredicted RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 GRM6O15303 877 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 MAGEB4O15481 346 aaPredicted RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 EPHX1P07099 455 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 IL7P13232 177 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TIMP2P16035 220 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 AP1S2P56377 157 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 CXCR4P61073 352 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TEAD4Q15561 434 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 FNDC3BQ53EP0 1204 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 LIPJQ5W064 366 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 PLAG1Q6DJT9 500 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 SIGIRRQ6IA17 410 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 FAM83HQ6ZRV2 1179 aaPredicted RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 SYT9Q86SS6 491 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TMEFF1Q8IYR6 380 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 KCT2Q8NC54 265 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 VN1R2Q8NFZ6 395 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 PIGKQ92643 395 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 DCLRE1CQ96SD1 692 aaKnown RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 PLA2G12AQ9BZM1 189 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 HHATLQ9HCP6 504 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 CCDC177Q9NQR7 707 aaPredicted RBP8.41□□□□□ -1.06
THBS3-201ENST00000368378 NKIRAS2Q9NYR9 191 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TEKT2Q9UIF3 430 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 TBC1D24Q9ULP9 559 aa8.41□□□□□ -1.06
THBS3-201ENST00000368378 NPIPA5A0A0B4J1W7 369 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 MEIOCA2RUB1 952 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 NPIPA7E9PJI5 369 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 AKR7A2O43488 359 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 NARSO43776 548 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 SLC2A10O95528 541 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 SYPP08247 313 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 FURINP09958 794 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 NPIPA8P0DM63 369 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 ALAS2P22557 587 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 ETV5P41161 510 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 MLLT3P42568 568 aaPredicted RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 SSR2P43308 183 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 ASMTP46597 345 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 DGKGP49619 791 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 ETV1P50549 477 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 STXBP1P61764 594 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 TAP2Q03519 686 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 HEPACAMQ14CZ8 416 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 FAM27D1Q5T7N8 215 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 PNCKQ6P2M8 343 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 TTC23LQ6PF05 361 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 HSDL2Q6YN16 418 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 SLCO4C1Q6ZQN7 724 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 PARS2Q7L3T8 475 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 GRASPQ7Z6J2 395 aaPredicted RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 ADGRD2Q7Z7M1 963 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 REPS1Q96D71 796 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 FAM46AQ96IP4 442 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 BBS4Q96RK4 519 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 SDHCQ99643 169 aaPredicted RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 EPYCQ99645 322 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 GPA33Q99795 319 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 RSPO3Q9BXY4 272 aaPredicted RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 UCK2Q9BZX2 261 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 C11orf54Q9H0W9 315 aaPredicted RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 SLC13A4Q9UKG4 626 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 ZNF860A6NHJ4 632 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 GMFGO60234 142 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 HPGDSO60760 199 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 SLITRK5O94991 958 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 H1F0P07305 194 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 ACP5P13686 325 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 MYL12AP19105 171 aa8.4□□□□□ -1.06
THBS3-201ENST00000368378 CCT3P49368 545 aaKnown RBP8.4□□□□□ -1.06
THBS3-201ENST00000368378 CLCNKAP51800 687 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms