RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PGCP20142 388 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MC3RP41968 323 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 CD97P48960 835 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 POU3F4P49335 361 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 GRM7Q14831 915 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SAMD12Q8N8I0 201 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 INO80EQ8NBZ0 244 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 OR5D16Q8NGK9 328 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ABHD5Q8WTS1 349 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 C12orf43Q96C57 262 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 PITX2Q99697 317 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ACTR10Q9NZ32 417 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 HCFC2Q9Y5Z7 792 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MYH11P35749 1972 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 E7ESA3 106 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 FAAHO00519 579 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 BPNT1O95861 308 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 HRH2P25021 359 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SELENOVP59797 346 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 HERV-K104P61576 105 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 NIPAL1Q6NVV3 410 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 LEG1Q6P5S2 330 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 CCDC80Q76M96 950 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF765Q7L2R6 523 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 FAM217AQ8IXS0 508 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 CD200R1Q8TD46 325 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SGTBQ96EQ0 304 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SLC45A3Q96JT2 553 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ALOXE3Q9BYJ1 711 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 DHDHQ9UQ10 334 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 SH2B3Q9UQQ2 575 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 IFNA21P01568 189 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 APOC1P02654 83 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 DLX2Q07687 328 aaPredicted RBP12.27□□□□□ -0.44
PTPRK-207ENST00000368226 ATP6AP1Q15904 470 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 TRIB3Q96RU7 358 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 MROQ9BYG7 248 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 ZDHHC7Q9NXF8 308 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 DNMT3BQ9UBC3 853 aaKnown RBP12.27□□□□□ -0.44
PTPRK-207ENST00000368226 ADAMTS6Q9UKP5 1117 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 NUP50Q9UKX7 468 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 A8MVJ9 347 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 KDELR2P33947 212 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 GGT2P36268 569 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 ERVFC1P60507 584 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 CEACAM19Q7Z692 300 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 PLCZ1Q86YW0 608 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 PIANPQ8IYJ0 282 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 SLC44A3Q8N4M1 653 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 OR2L2Q8NH16 312 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 TESCQ96BS2 214 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 HPF1Q9NWY4 346 aa12.27□□□□□ -0.44
PTPRK-207ENST00000368226 NUFIP1Q9UHK0 495 aaKnown RBP12.27□□□□□ -0.44
PTPRK-207ENST00000368226 MYH6P13533 1939 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 KANTRA0A1W2PQU2 76 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 FLRT2O43155 660 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 CTSCP53634 463 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 FOXK1P85037 733 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 SEC23BQ15437 767 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 UGT3A2Q3SY77 523 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 ALG10BQ5I7T1 473 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 DPAGT1Q9H3H5 408 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 NANSQ9NR45 359 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 CCL26Q9Y258 94 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 EXOSC1Q9Y3B2 195 aaKnown RBP12.27□□□□□ -0.45
PTPRK-207ENST00000368226 SLC9B1P1A6NJY1 282 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 E2F3O00716 465 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 GKN3PP0CG01 181 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 DRD1P21728 446 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 LHCGRP22888 699 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 STEAP4Q687X5 459 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 SYCE2Q6PIF2 218 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
PTPRK-207ENST00000368226 DNAAF1Q8NEP3 725 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 M0R3H8 397 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 CFL1P23528 166 aaKnown RBP12.27□□□□□ -0.45
PTPRK-207ENST00000368226 PYCR1P32322 319 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 GLP1RP43220 463 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 SLC15A1P46059 708 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 RGRP47804 291 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 IST1P53990 364 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 GRIK2Q13002 908 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 HYAL4Q2M3T9 481 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 OGFRL1Q5TC84 451 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-207ENST00000368226 C22orf42Q6IC83 251 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 UNC5DQ6UXZ4 953 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 NEIL2Q969S2 332 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 ZUFSPQ96AP4 578 aa12.27□□□□□ -0.45
PTPRK-207ENST00000368226 MYH8P13535 1937 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms