RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZCCHC7Q8N3Z6 543 aaKnown RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TNIP2Q8NFZ5 429 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 OR2L5Q8NG80 312 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 GOT1L1Q8NHS2 421 aaPredicted RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 CDC26Q8NHZ8 85 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 ADAMTS17Q8TE56 1095 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 PPCDCQ96CD2 204 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TM4SF18Q96CE8 201 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 MS4A6EQ96DS6 147 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TM4SF19Q96DZ7 209 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 LRGUKQ96M69 825 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 GBP5Q96PP8 586 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 CPPED1Q9BRF8 314 aaPredicted RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 INPP5KQ9BT40 448 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 TBCDQ9BTW9 1192 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 SORBS1Q9BX66 1292 aaKnown RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 SLC6A16Q9GZN6 736 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 AICDAQ9GZX7 198 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 SH3BP4Q9P0V3 963 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 C5AR2Q9P296 337 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 POMT2Q9UKY4 750 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 FARSAQ9Y285 508 aaKnown RBP10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 NTNG1Q9Y2I2 539 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 SNX13Q9Y5W8 968 aa10.56□□□□□ -0.72
CSNK1E-202ENST00000366216 H3BNX3 289 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RTCAO00442 366 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 SCELO95171 688 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ANP32DO95626 131 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 GBAP04062 536 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 SERPIND1P05546 499 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 IL3P08700 152 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 DRD2P14416 443 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 DDCP20711 480 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 MAGP20916 626 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 PPIBP23284 216 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 CDKN2CP42773 168 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 MTPNP58546 118 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RGS1Q08116 209 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RAPSNQ13702 412 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 SELPLGQ14242 412 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 GTDC1Q4AE62 458 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ZNF385BQ569K4 471 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 TOR1AIP1Q5JTV8 583 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ARMC6Q6NXE6 501 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 TRIM40Q6P9F5 258 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ABHD17CQ6PCB6 329 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 MED25Q71SY5 747 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RNF44Q7L0R7 432 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 PRSS42Q7Z5A4 293 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 VN1R4Q7Z5H5 301 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ASPGQ86U10 573 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 TRIM73Q86UV7 250 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 SPATA24Q86W54 205 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 CALHM3Q86XJ0 350 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 FAM47BQ8NA70 645 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 HIPK4Q8NE63 616 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RSC1A1Q92681 617 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 GAL3ST3Q96A11 431 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 MIEF2Q96C03 454 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 RSRC1Q96IZ7 334 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ZNF583Q96ND8 569 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 FCRL4Q96PJ5 515 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 KCNC2Q96PR1 638 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 OR2A5Q96R48 311 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 PANX1Q96RD7 426 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 ECSITQ9BQ95 431 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 KLHL31Q9H511 634 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 KAT8Q9H7Z6 458 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 PDE7BQ9NP56 450 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 PRDM7Q9NQW5 492 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 AGPAT4Q9NRZ5 378 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 C6orf203Q9P0P8 240 aaPredicted RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 GMPR2Q9P2T1 348 aaKnown RBP10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 MAGEL2Q9UJ55 1249 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 OSGIN2Q9Y236 505 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 KLHL20Q9Y2M5 609 aa10.55□□□□□ -0.72
CSNK1E-202ENST00000366216 URADA6NGE7 173 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 EVPLLA8MZ36 301 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 FAM220BPB1ANY3 271 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 ARPC2O15144 300 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 ERI3O43414 337 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 TMPRSS11DO60235 418 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 GUCY1B2O75343 617 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 UBXN7O94888 489 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 B3GALT4O96024 378 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 SLC35G6P0C7Q6 338 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 FOLR1P15328 257 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 NELFEP18615 380 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 ATP6V1B2P21281 511 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 HIST1H1TP22492 207 aaPredicted RBP10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 ATP5A1P25705 553 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 SSR2P43308 183 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 PTDSS1P48651 473 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 ERFP50548 548 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 GZMMP51124 257 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 RRADP55042 308 aa10.54□□□□□ -0.72
CSNK1E-202ENST00000366216 MRPS22P82650 360 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms