RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 COX6B1P14854 86 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TAC1P20366 129 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ATP5F1P24539 256 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HSD3B2P26439 372 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MAPK12P53778 367 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PRKAA2P54646 552 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TRA2BP62995 288 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TFF3Q07654 80 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MAP4K2Q12851 820 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DUSP8Q13202 625 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PRICKLE4Q2TBC4 344 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MMP21Q8N119 569 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR7G1Q8NGA0 311 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LILRB4Q8NHJ6 448 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 L3HYPDHQ96EM0 354 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SMC6Q96SB8 1091 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 QPCTLQ9NXS2 382 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 COQ3Q9NZJ6 369 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 VPS29Q9UBQ0 182 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RNF6Q9Y252 685 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ATP6AP2A0A1C7CYW4 349 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SERTM1A2A2V5 107 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GUCY1B2O75343 617 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ATP6AP2O75787 350 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SUPT7LO94864 414 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GSTA1P08263 222 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RHOXF2BP0C7M4 288 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CHN1P15882 459 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CHRNB4P30926 498 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NUP107P57740 925 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RAE1P78406 368 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DUSP2Q05923 314 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PMPCAQ10713 525 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CSTF3Q12996 717 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RASA2Q15283 850 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TEX35Q5T0J7 233 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PRAMEF20Q5VT98 475 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FNDC7Q5VTL7 733 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TMEM64Q6YI46 380 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GDF7Q7Z4P5 450 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TAGAPQ8N103 731 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CNPY4Q8N129 248 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C1orf52Q8N6N3 182 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CDYL2Q8N8U2 506 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 EIF1ADQ8N9N8 165 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LRRN4CLQ8ND94 238 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ASB5Q8WWX0 329 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HBEGFQ99075 208 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RHOXF2Q9BQY4 288 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SPRR3Q9UBC9 169 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 EMCNQ9ULC0 261 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 DTX4Q9Y2E6 619 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NPFFR2Q9Y5X5 522 aa12.56□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HCFC1P51610 2035 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 EXPH5Q8NEV8 1989 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 G3V2L1 256 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TOXO94900 526 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SNRPB2P08579 225 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GPX3P22352 226 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ACVR2AP27037 513 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FBXW4P57775 412 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 KCNJ2P63252 427 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TBCELQ5QJ74 424 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FAM111BQ6SJ93 734 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SLC22A9Q8IVM8 553 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SIMC1Q8NDZ2 872 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FAM13CQ8NE31 585 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR5M9Q8NGP3 310 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SPPL2AQ8TCT8 520 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RND1Q92730 232 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CNRIP1Q96F85 164 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ANGPTL4Q9BY76 406 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ACPTQ9BZG2 426 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 UBQLN3Q9H347 655 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GSTO2Q9H4Y5 243 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NMRK1Q9NWW6 199 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TNFRSF10DQ9UBN6 386 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HEY2Q9UBP5 337 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MCM8Q9UJA3 840 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 BOKQ9UMX3 212 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PCDHGB3Q9Y5G1 929 aa12.55□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NINQ8N4C6 2090 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TRGV5A0A0B4J1U4 118 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 A0A1W2PPM1 405 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GOLGA6L10A6NI86 522 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 UBFD1O14562 309 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ULK1O75385 1050 aa12.54□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LRATO95237 230 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms