RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 IGFBP5P24593 272 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ACAT1P24752 427 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC1A3P43003 542 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 MATR3P43243 847 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 OR3A3P47888 321 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 APOC4P55056 127 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 UCP2P55851 309 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 NLRP11P59045 1033 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RPS11P62280 158 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RPL32P62910 135 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 VAMP2P63027 116 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 UBXN2AP68543 259 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 OTUD4Q01804 1114 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CNTN2Q02246 1040 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CACNG1Q06432 222 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ENPEPQ07075 957 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CNTN1Q12860 1018 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 IHHQ14623 411 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 PPA1Q15181 289 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 NSDHLQ15738 373 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 STK11Q15831 433 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 BAK1Q16611 211 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ASTE1Q2TB18 679 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 DDX59Q5T1V6 619 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RNASEH2BQ5TBB1 312 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TXNRD3NBQ6F5E7 133 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 PRR27Q6MZM9 219 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TTC27Q6P3X3 843 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMEM154Q6P9G4 183 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 WDR74Q6RFH5 385 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SPINT4Q6UDR6 99 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 APOOLQ6UXV4 268 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF730Q6ZMV8 503 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RFPL4BQ6ZWI9 263 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 USP50Q70EL3 339 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 PRSS41Q7RTY9 318 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 VSIG1Q86XK7 387 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ARMC8Q8IUR7 673 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF567Q8N184 647 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CAMKVQ8NCB2 501 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 C8orf46Q8TAG6 207 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SCFD2Q8WU76 684 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMEM158Q8WZ71 300 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ARHGEF2Q92974 986 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 COQ7Q99807 217 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 HSPB9Q9BQS6 159 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CARD6Q9BX69 1037 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TSSK1BQ9BXA7 367 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF717Q9BY31 904 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 WWP1Q9H0M0 922 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 PPIL3Q9H2H8 161 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 MMP27Q9H306 513 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RIMS4Q9H426 269 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 OPA3Q9H6K4 179 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SH2D4AQ9H788 454 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 KAT8Q9H7Z6 458 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 DCLRE1BQ9H816 532 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 NOL11Q9H8H0 719 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZDHHC11Q9H8X9 412 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RPF1Q9H9Y2 349 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 IL1RL2Q9HB29 575 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 CDH20Q9HBT6 801 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SH2D2AQ9NP31 389 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 EQTNQ9NQ60 294 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 PCDHB16Q9NRJ7 776 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 MED17Q9NVC6 651 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TXNDC16Q9P2K2 825 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TBC1D29Q9UFV1 150 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 OR12D3Q9UGF7 316 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 TRMT6Q9UJA5 497 aaKnown RBP-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 RPH3ALQ9UNE2 315 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 KLHDC2Q9Y2U9 406 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 IFT52Q9Y366 437 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 SH3GLB1Q9Y371 365 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 POMT1Q9Y6A1 747 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 YEATS2Q9ULM3 1422 aa-0.42□□□□□ -2.48
RNU6-54P-201ENST00000365563 FAM237BA0A1B0GVD1 139 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 C2orf92A0A1B0GVN3 265 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 A0A1W2PR77 199 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 DHRS7CA6NNS2 312 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 YDJCA8MPS7 323 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SULT2B1O00204 365 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 IPO8O15397 1037 aaKnown RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZBED4O75132 1171 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 GBAP04062 536 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 LYNP07948 512 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 FHP07954 510 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 LYNX1P0DP58 116 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 NTSP30990 170 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 APLNRP35414 380 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ID1P41134 155 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 UQCRFS1P47985 274 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ALDH3B2P48448 385 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 VCPP55072 806 aaKnown RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 CASP6P55212 293 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ARL4CP56559 192 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 BACE1P56817 501 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 PRAMEP78395 509 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 TMF1P82094 1093 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 CXCL9Q07325 125 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms