RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 AHSA1O95433 338 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 IL7P13232 177 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 DNASE1P24855 282 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 VSX2P58304 361 aaPredicted RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 TAS2R38P59533 333 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 CDKL4Q5MAI5 379 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 SERPINA11Q86U17 422 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 KLHDC8AQ8IYD2 350 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 OR2M4Q96R27 311 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 LINC00597Q9H2U6 94 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 OLAHQ9NV23 265 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 MLXQ9UH92 298 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ERVK-11Q9UQG0 969 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 PRSS21Q9Y6M0 314 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ANXA3P12429 323 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 EPCAMP16422 314 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 GAS6Q14393 721 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 PTPRRQ15256 657 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 NDUFAF5Q5TEU4 345 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 PMM1Q92871 262 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 FAM46AQ96IP4 442 aaKnown RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 ACTL8Q9H568 366 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 RNF186Q9NXI6 227 aa13.07□□□□□ -0.32
VCP-201ENST00000358901 FARSAQ9Y285 508 aaKnown RBP13.07□□□□□ -0.32
VCP-201ENST00000358901 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 UNC119BA6NIH7 251 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 MTRF1O75570 445 aaKnown RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 CAPNS1P04632 268 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 ALPLP05186 524 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 CYBAP13498 195 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 TACR1P25103 407 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 UBXN2BQ14CS0 331 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 GPR149Q86SP6 731 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 NRMQ8IXM6 262 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 OR5T3Q8NGG3 340 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 OR8S1Q8NH09 359 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 CHMP1AQ9HD42 196 aaPredicted RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 ABCG2Q9UNQ0 655 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 E2F3O00716 465 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 MUSKO15146 869 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 AK4P27144 223 aaPredicted RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 VIPR2P41587 438 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 RAB2AP61019 212 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 CRYZQ08257 329 aaKnown RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 NTRK2Q16620 822 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 ULK3Q6PHR2 472 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 MCEMP1Q8IX19 187 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 LRRC25Q8N386 305 aaPredicted RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 RDH14Q9HBH5 336 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SLC22A31A6NKX4 558 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 GABRR3A8MPY1 467 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 TGM5O43548 720 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 ADH7P40394 386 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 NTHL1P78549 312 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 PLBD1Q6P4A8 553 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 UNC5DQ6UXZ4 953 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■□□ 16.5
VCP-201ENST00000358901 SLC29A4Q7RTT9 530 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 THAP6Q8TBB0 222 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 CASTOR1Q8WTX7 329 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 NT5C3BQ969T7 300 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SRA1Q9HD15 236 aaKnown RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 OR1A2Q9Y585 309 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 TRBV2A0A0J9YWF9 115 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 A8MU76 341 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SCGNO76038 276 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 PDHA2P29803 388 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 PCGF2P35227 344 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 GGT2P36268 569 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SOX3P41225 446 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 OR4C11Q6IEV9 310 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 TMEM17Q86X19 198 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 FUNDC1Q8IVP5 155 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 B3GNT7Q8NFL0 401 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 PXYLP1Q8TE99 480 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
VCP-201ENST00000358901 SLC39A13Q96H72 371 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SLC2A11Q9BYW1 496 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SERINC1Q9NRX5 453 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 SH2B3Q9UQQ2 575 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 MAB21L2Q9Y586 359 aa13.06□□□□□ -0.32
VCP-201ENST00000358901 C11orf98E9PRG8 122 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 FRS3O43559 492 aa13.05□□□□□ -0.32
VCP-201ENST00000358901 RAB28P51157 221 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms