RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 A0A0A6YYD5 115 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 IGLON5A6NGN9 336 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 WASHC1A8K0Z3 465 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZNF670-ZNF695F2Z2N8 137 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 CACNB4O00305 520 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 KIAA0355O15063 1070 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 DYRK3O43781 588 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 LCMT2O60294 686 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 NFATC1O95644 943 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TP53P04637 393 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 GSTT2P0CG29 244 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 GSTT2BP0CG30 244 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 MMP11P24347 488 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 BUD31P41223 144 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 GJA8P48165 433 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TGM4P49221 684 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 CSNK1G2P78368 415 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 LSM11P83369 360 aaKnown RBP eCLIP8.11□□□□□ -1.11
RFX3-202ENST00000358730 MXD1Q05195 221 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 MLLT11Q13015 90 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 GINS1Q14691 196 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 OCLNQ16625 522 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 UAP1L1Q3KQV9 507 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SYT14P1Q58G82 188 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 OR4C11Q6IEV9 310 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 WASH2PQ6VEQ5 465 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TMPRSS11AQ6ZMR5 421 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 GDPGP1Q6ZNW5 385 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZER1Q7Z7L7 766 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 RAB42Q8N4Z0 105 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 PROKR2Q8NFJ6 384 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 OR6T1Q8NGN1 323 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SUSD6Q92537 303 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZNF764Q96H86 408 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 LRR1Q96L50 414 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 BBS4Q96RK4 519 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TMEM245Q9H330 911 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 RERGLQ9H628 205 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 DDX31Q9H8H2 851 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 SLC35C2Q9NQQ7 365 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 HCN2Q9UL51 889 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SSR3Q9UNL2 185 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SNRNP200O75643 2136 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 ANTXRLA6NF34 631 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 H3BQ06 376 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 ERAL1O75616 437 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 APOL3O95236 402 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 RAB36O95755 333 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 EPHX1P07099 455 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 CHRM4P08173 479 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 BMPR1AP36894 532 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 LASP1Q14847 261 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 MLC1Q15049 377 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 GPR19Q15760 415 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 NDUFA9Q16795 377 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 GAB4Q2WGN9 574 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZMAT1Q5H9K5 638 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZNF793Q6ZN11 406 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 USP30Q70CQ3 517 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SPRED2Q7Z698 418 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 C11orf74Q86VG3 221 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TP53I13Q8NBR0 393 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 OR52I1Q8NGK6 324 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 BBS10Q8TAM1 723 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 EFHD2Q96C19 240 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZNF707Q96C28 371 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 TMCO6Q96DC7 493 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 PAWRQ96IZ0 340 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 PRRC1Q96M27 445 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 C12orf66Q96MD2 445 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 FERD3LQ96RJ6 166 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 POLDIP3Q9BY77 421 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 XKR8Q9H6D3 395 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 NT5DC2Q9H857 520 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 MAN2C1Q9NTJ4 1040 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 IMP3Q9NV31 184 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 ZSCAN32Q9NX65 697 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 ADAM29Q9UKF5 820 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 TBC1D24Q9ULP9 559 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 OR1A2Q9Y585 309 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 V9GYH0 126 aa8.11□□□□□ -1.11
RFX3-202ENST00000358730 KIAA0100Q14667 2235 aaKnown RBP8.11□□□□□ -1.11
RFX3-202ENST00000358730 LATO43561 262 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PCDH8O95206 1070 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 FGBP02675 491 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ACP5P13686 325 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 IL12RB1P42701 662 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ALDH6A1Q02252 535 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 COX10Q12887 443 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 WSCD2Q2TBF2 565 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 ATAT1Q5SQI0 421 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PIP5KL1Q5T9C9 394 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 RSBN1Q5VWQ0 802 aaPredicted RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 MEX3DQ86XN8 651 aaKnown RBP8.1□□□□□ -1.11
RFX3-202ENST00000358730 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
RFX3-202ENST00000358730 PSD4Q8NDX1 1056 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms