RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MCCC1Q96RQ3 725 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZSCAN5AQ9BUG6 496 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BTBD2Q9BX70 525 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ABCG5Q9H222 651 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SPNS1Q9H2V7 528 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MVB12BQ9H7P6 319 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ENAMQ9NRM1 1142 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 P2RX2Q9UBL9 471 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SH2B3Q9UQQ2 575 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MAU2Q9Y6X3 613 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 B4DXG7 233 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FAAHO00519 579 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 GNB5O14775 395 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SLC16A5O15375 505 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PI15O43692 258 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HBQ1P09105 142 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 CSF3P09919 207 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PRKCAP17252 672 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ALAS2P22557 587 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ELAVL4P26378 380 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SOX18P35713 384 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 XCR1P46094 333 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 WNT4P56705 351 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RAE1P78406 368 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 LSM11P83369 360 aaKnown RBP eCLIP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 BNC1Q01954 994 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 P2RY14Q15391 338 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FLYWCH1Q4VC44 716 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ACSM5Q6NUN0 579 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RD3Q7Z3Z2 195 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 OR5AR1Q8NGP9 310 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 WDR20Q8TBZ3 569 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 BTN2A2Q8WVV5 523 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SMG7Q92540 1137 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ECHDC3Q96DC8 303 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ARSGQ96EG1 525 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FERD3LQ96RJ6 166 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SPATA9Q9BWV2 254 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 CWH43Q9H720 699 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 C3orf14Q9HBI5 128 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RNF186Q9NXI6 227 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 EIF3KQ9UBQ5 218 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 TRBV5-4A0A0C4DH59 114 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ZAR1LA6NP61 321 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PGRMC2O15173 223 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PCCBP05166 539 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HSD3B1P14060 373 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HSD3B2P26439 372 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ERP29P30040 261 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HOXC8P31273 242 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ACVR1BP36896 505 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 KIR2DL3P43628 341 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 GIPRP48546 466 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PCDH1Q08174 1060 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SUZ12Q15022 739 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF311Q5JNZ3 666 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FAM205BPQ63HN1 556 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SLC27A4Q6P1M0 643 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 NXPE4Q6UWF7 544 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SLCO4C1Q6ZQN7 724 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RFPL4BQ6ZWI9 263 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SETD6Q8TBK2 473 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RASSF5Q8WWW0 418 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SMPDL3AQ92484 453 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 TFGQ92734 400 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HMX1Q9NP08 348 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SPATA6Q9NWH7 488 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 HCFC1R1Q9NWW0 138 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 TAS2R7Q9NYW3 318 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 A3GALT2U3KPV4 340 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 H0YIV9 168 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 GFYI3L273 518 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 REM1O75628 298 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SCO1O75880 301 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 OR5F1O95221 314 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SAGP10523 405 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 DRD5P21918 477 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SSTR2P30874 369 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF81P51508 661 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PNLIPRP1P54315 467 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 WDR5P61964 334 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 GPLD1P80108 840 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RHAGQ02094 409 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RPA4Q13156 261 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FGFBP1Q14512 234 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SAXO2Q658L1 398 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 METTL2BQ6P1Q9 378 aaKnown RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 BHLHB9Q6PI77 547 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FAM92BQ6ZTR7 304 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 FAM129CQ86XR2 697 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF433Q8N7K0 673 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 GDPD1Q8N9F7 314 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ANKK1Q8NFD2 765 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 PROKR2Q8NFJ6 384 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 OR52I1Q8NGK6 324 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 BBS10Q8TAM1 723 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms