RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TMEM163Q8TC26 289 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 SOSTQ9BQB4 213 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 KATNB1Q9BVA0 655 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 MS4A8Q9BY19 250 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 MMP28Q9H239 520 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 NT5DC2Q9H857 520 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 BCL2L10Q9HD36 194 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 TAS2R7Q9NYW3 318 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 PHF11Q9UIL8 331 aa16.75■□□□□ 0.27
RTN4-204ENST00000357732 LAMA2P24043 3122 aaKnown RBP16.75■□□□□ 0.27
RTN4-204ENST00000357732 LILRB3O75022 631 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 GUCY1B2O75343 617 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 CTSLP07711 333 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 TYRP14679 529 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 HSD17B2P37059 387 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 OPRD1P41143 372 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 GAS1P54826 345 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 RPS26P62854 115 aaKnown RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 TRA2BP62995 288 aaKnown RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 MXD1Q05195 221 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 NOGQ13253 232 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 ARHGAP19Q14CB8 494 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 MINDY4Q4G0A6 757 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 PYDC2Q56P42 97 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 PLET1Q6UQ28 207 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 FAM83HQ6ZRV2 1179 aaPredicted RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 TRAPPC5Q8IUR0 188 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 ADGRF3Q8IZF5 1079 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 GJD3Q8N144 294 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 PRRC1Q96M27 445 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 AIF1LQ9BQI0 150 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 NIPAL2Q9H841 368 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 CCDC88CQ9P219 2028 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 TRDV1A0A1B0GX56 115 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 CASC3O15234 703 aaKnown RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 SLC28A2O43868 658 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 MMP11P24347 488 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 BSGP35613 385 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 IFNGR2P38484 337 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 DGKEP52429 567 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 GNG2P59768 71 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 PAQR6Q6TCH4 344 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 TRMT11Q7Z4G4 463 aaKnown RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 ZNF438Q7Z4V0 828 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 PLCZ1Q86YW0 608 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 SLAIN1Q8ND83 568 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 ZNF740Q8NDX6 193 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 OR4K5Q8NGD3 323 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 OR4D11Q8NGI4 311 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 OR2L2Q8NH16 312 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 DMRTB1Q96MA1 342 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 RSPO3Q9BXY4 272 aaPredicted RBP16.74■□□□□ 0.27
RTN4-204ENST00000357732 SPHK2Q9NRA0 654 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
RTN4-204ENST00000357732 ERGP11308 486 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 GALP22466 123 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 GPC1P35052 558 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 CCT3P49368 545 aaKnown RBP16.73■□□□□ 0.27
RTN4-204ENST00000357732 DAB2P98082 770 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 RPA4Q13156 261 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 ZER1Q7Z7L7 766 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 NUDT13Q86X67 352 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 MMP21Q8N119 569 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 MORN4Q8NDC4 146 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 OR7G1Q8NGA0 311 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 CHFRQ96EP1 664 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 CAMK1GQ96NX5 476 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 TTYH2Q9BSA4 534 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 PCBD2Q9H0N5 130 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 RANGRFQ9HD47 186 aaPredicted RBP16.73■□□□□ 0.27
RTN4-204ENST00000357732 WASH6PQ9NQA3 447 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 RBFOX1Q9NWB1 397 aaKnown RBP16.73■□□□□ 0.27
RTN4-204ENST00000357732 PLA2G10O15496 165 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 SOD1P00441 154 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 KIR2DL3P43628 341 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 MAP2K3P46734 347 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 ACSM1Q08AH1 577 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 PRAMEF8Q5VWM4 474 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 PRAMEF7Q5VXH5 474 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 TRIQKQ629K1 86 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 WDR53Q7Z5U6 358 aaPredicted RBP16.73■□□□□ 0.27
RTN4-204ENST00000357732 C17orf64Q86WR6 236 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 C19orf18Q8NEA5 215 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 RAB8BQ92930 207 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 C1GALT1C1Q96EU7 318 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 SLC38A2Q96QD8 506 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 ARHGAP9Q9BRR9 750 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 ACOXLQ9NUZ1 547 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 NUFIP1Q9UHK0 495 aaKnown RBP16.73■□□□□ 0.27
RTN4-204ENST00000357732 ASB4Q9Y574 426 aa16.73■□□□□ 0.27
RTN4-204ENST00000357732 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 KIAA0355O15063 1070 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 FGF19O95750 216 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 PRKAR1AP10644 381 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 SYN1P17600 705 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 DEFB103AP81534 67 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 SNAPC1Q16533 368 aa16.72■□□□□ 0.27
RTN4-204ENST00000357732 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.72■□□□□ 0.275e-18■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms