RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 HSD11B1LQ7Z5J1 315 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 P2RY8Q86VZ1 359 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR2I1PQ8NGU4 316 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 HAVCR1Q96D42 359 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 NRSN2Q9GZP1 204 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 OR10A4Q9H209 315 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 CCDC86Q9H6F5 360 aaKnown RBP7.01□□□□□ -1.29
VPS13A-202ENST00000357409 WDR76Q9H967 626 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 RNF215Q9Y6U7 377 aa7.01□□□□□ -1.29
VPS13A-202ENST00000357409 TACSTD2P09758 323 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ARAFP10398 606 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 CTHP32929 405 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 WDR5P61964 334 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 MELKQ14680 651 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 C6orf120Q7Z4R8 191 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 CD163Q86VB7 1156 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 FAM86B1Q8N7N1 296 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 FAM83CQ9BQN1 747 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 TREM2Q9NZC2 230 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 GLS2Q9UI32 602 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 PLOD2O00469 737 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 SOCS6O14544 535 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ALOX12BO75342 701 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 SLC2A2P11168 524 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 AKAP14Q86UN6 197 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 PLXDC1Q8IUK5 500 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 GLB1L2Q8IW92 636 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 KBTBD8Q8NFY9 601 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ZFRQ96KR1 1074 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 COG8Q96MW5 612 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 NDUFA13Q9P0J0 144 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 SPO11Q9Y5K1 396 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 R4GN57 208 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 IGFBP1P08833 259 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 HSD3B1P14060 373 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 SHMT2P34897 504 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF468Q5VIY5 522 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 BPHLQ86WA6 291 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 VRK2Q86Y07 508 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ZMYND19Q96E35 227 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 C14orf119Q9NWQ9 140 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ASB6Q9NWX5 421 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 CFAP74Q9C0B2 1584 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 NPIPB15A6NHN6 443 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 ARGFXA6NJG6 315 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ACOX3O15254 700 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 PRPS1L1P21108 318 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 JAM2P57087 298 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 TAP2Q03519 686 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 C3orf33Q6P1S2 294 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 VASH1Q7L8A9 365 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 TECPR1Q7Z6L1 1165 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 NRROSQ86YC3 692 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 CILP2Q8IUL8 1156 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 MFSD6LQ8IWD5 586 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 THUMPD1Q9NXG2 353 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 PIRO00625 290 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 FMO6PO60774 539 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF136P52737 540 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 FOXA1P55317 472 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 WDR4P57081 412 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 GNB2P62879 340 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 PIN1Q13526 163 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 FAM83HQ6ZRV2 1179 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 OR9Q2Q8NGE9 314 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 GTF2H4Q92759 462 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 TCEAL3Q969E4 200 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 BIRC7Q96CA5 298 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ARL5BQ96KC2 179 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 REEP4Q9H6H4 257 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ACTR10Q9NZ32 417 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF225Q9UK10 706 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 GTF3C5Q9Y5Q8 519 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 ABCA6Q8N139 1617 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 HOXB8P17481 243 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 BCL6P41182 706 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 KCNAB1Q14722 419 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 HMBOX1Q6NT76 420 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 LILRA3Q8N6C8 439 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 CMASQ8NFW8 434 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 FANK1Q8TC84 345 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 GNPDA2Q8TDQ7 276 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 NUDT8Q8WV74 236 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 LPAR4Q99677 370 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 OSBPL7Q9BZF2 842 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 SMIM3Q9BZL3 60 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 TWSG1Q9GZX9 223 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 IGSF9Q9P2J2 1179 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 EXTL2Q9UBQ6 330 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 H7C1C5 153 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 ADH1BP00325 375 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 RPLP0P05388 317 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 LCN6P62502 163 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 MYBPHQ13203 477 aa7□□□□□ -1.29
VPS13A-202ENST00000357409 MRPL49Q13405 166 aaKnown RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 TMEM173Q86WV6 379 aaPredicted RBP7□□□□□ -1.29
VPS13A-202ENST00000357409 NAGSQ8N159 534 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms