RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 AHRP35869 848 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 EXOSC7Q15024 291 aaKnown RBP16.59■□□□□ 0.25
NPAS3-202ENST00000356141 GPR107Q5VW38 600 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ARMC6Q6NXE6 501 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 TAGAPQ8N103 731 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ZFYVE21Q9BQ24 234 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 RAD21L1Q9H4I0 556 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 FANCEQ9HB96 536 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 DUSP12Q9UNI6 340 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 FAM32AQ9Y421 112 aaKnown RBP16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ZNF780BQ9Y6R6 833 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 OR2A25A4D2G3 310 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 KDM1AO60341 852 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 FCMRO60667 390 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 CHRM4P08173 479 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 TFPTP0C1Z6 253 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 FPR1P21462 350 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ITGA1P56199 1179 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 RPS15AP62244 130 aaKnown RBP16.59■□□□□ 0.25
NPAS3-202ENST00000356141 FADDQ13158 208 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 NNATQ16517 81 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ADPRMQ3LIE5 342 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 LAIR2Q6ISS4 152 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 SLC48A1Q6P1K1 146 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 USP53Q70EK8 1073 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 USP51Q70EK9 711 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ARMC8Q8IUR7 673 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 Q8N9G6 341 aaPredicted RBP16.59■□□□□ 0.25
NPAS3-202ENST00000356141 NUP43Q8NFH3 380 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 OR7G2Q8NG99 324 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 KLHL6Q8WZ60 621 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 ARMC7Q9H6L4 198 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 NEUROD4Q9HD90 331 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 MAPRE3Q9UPY8 281 aa16.59■□□□□ 0.25
NPAS3-202ENST00000356141 NCOR1O75376 2440 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 A0A0A6YYC8 382 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 TRBV4-1A0A0J9YWV2 114 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 C2orf74A8MZ97 194 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 I3L1I5 382 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 KCNJ13O60928 360 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 PABPC4LP0CB38 370 aaKnown RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 CD38P28907 300 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 NR1H2P55055 460 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 FOXL2P58012 376 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 ZNF630Q2M218 657 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 LRIT3Q3SXY7 679 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 TMEM35AQ53FP2 167 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 SLC16A11Q8NCK7 471 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 CHDHQ8NE62 594 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 PIK3C3Q8NEB9 887 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 OR10G2Q8NGC3 310 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 NCSTNQ92542 709 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 ZNF300Q96RE9 604 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 NT5DC2Q9H857 520 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 PAK1IP1Q9NWT1 392 aaPredicted RBP16.58■□□□□ 0.25
NPAS3-202ENST00000356141 PCOLCE2Q9UKZ9 415 aa16.58■□□□□ 0.25
NPAS3-202ENST00000356141 FFAR1O14842 300 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 MED26O95402 600 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 CSNK2A2P19784 350 aaPredicted RBP16.58■□□□□ 0.24
NPAS3-202ENST00000356141 ENPP1P22413 925 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 FUT5Q11128 374 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 KIR2DS3Q14952 304 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 PRR23CQ6ZRP0 262 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 LPCAT2Q7L5N7 544 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 TSPYL5Q86VY4 417 aaPredicted RBP16.58■□□□□ 0.24
NPAS3-202ENST00000356141 VRK2Q86Y07 508 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 CCDC71Q8IV32 467 aaPredicted RBP16.58■□□□□ 0.24
NPAS3-202ENST00000356141 CSNK1A1LQ8N752 337 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 ASB12Q8WXK4 309 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 SLC22A18Q96BI1 424 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 MPP4Q96JB8 637 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 TBC1D17Q9HA65 648 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 GIN1Q9NXP7 522 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 TSC22D4Q9Y3Q8 395 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 MAU2Q9Y6X3 613 aa16.58■□□□□ 0.24
NPAS3-202ENST00000356141 JRKO75564 520 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 PPP2R1BP30154 601 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 RAD23AP54725 363 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 UBE2IP63279 158 aaKnown RBP16.57■□□□□ 0.24
NPAS3-202ENST00000356141 BNIP3Q12983 259 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 MRM1Q6IN84 353 aaKnown RBP16.57■□□□□ 0.24
NPAS3-202ENST00000356141 OR52E4Q8NGH9 312 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 PHF10Q8WUB8 498 aaKnown RBP16.57■□□□□ 0.24
NPAS3-202ENST00000356141 WDR70Q9NW82 654 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 SOHLH2Q9NX45 425 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 GADD45GO95257 159 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 MAP2K4P45985 399 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 CHRNEQ04844 493 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 ARL14Q8N4G2 192 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 TMEM38AQ9H6F2 299 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 SLC2A4RGQ9NR83 387 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 CES1P1Q9UKY3 287 aa16.57■□□□□ 0.24
NPAS3-202ENST00000356141 CENPVL1A0A0U1RR11 272 aa16.56■□□□□ 0.24
NPAS3-202ENST00000356141 FGF17O60258 216 aa16.56■□□□□ 0.24
NPAS3-202ENST00000356141 HOXC4P09017 264 aaPredicted RBP16.56■□□□□ 0.24
NPAS3-202ENST00000356141 NT5EP21589 574 aa16.56■□□□□ 0.24
NPAS3-202ENST00000356141 AVPR1BP47901 424 aa16.56■□□□□ 0.24
NPAS3-202ENST00000356141 RPP38P78345 283 aaKnown RBP16.56■□□□□ 0.24
NPAS3-202ENST00000356141 TTC23Q5W5X9 447 aa16.56■□□□□ 0.24
NPAS3-202ENST00000356141 GIPC3Q8TF64 312 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms