RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CD1EP15812 388 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 MC3RP41968 323 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 SLC37A1P57057 533 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 MAP4K2Q12851 820 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 DUSP8Q13202 625 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 KCNAB2Q13303 367 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 LY6DQ14210 128 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 C6orf163Q5TEZ5 329 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 AGAP7PQ5VUJ5 663 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 PCSK4Q6UW60 755 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 HSDL2Q6YN16 418 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 ANKRD46Q86W74 232 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 C9orf40Q8IXQ3 194 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 MIER2Q8N344 545 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 CTHRC1Q96CG8 243 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 ZBED6CLQ96FA7 236 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 AGAP4Q96P64 663 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 ELAC2Q9BQ52 826 aaKnown RBP16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 ZNF71Q9NQZ8 489 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 ATAD3AQ9NVI7 634 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 KLHL14Q9P2G3 628 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 BCAP29Q9UHQ4 241 aa16.62■□□□□ 0.25
PDLIM7-202ENST00000355841 MKRN2OSH3BPM6 223 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 CBX7O95931 251 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 F10P00742 488 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 DRD4P21917 467 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 GPX3P22352 226 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 FRKP42685 505 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 CDK9P50750 372 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 WNT3P56703 355 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 FUT7Q11130 342 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 TCTN3Q6NUS6 607 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 CLECL1Q8IZS7 167 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 OR52R1Q8NGF1 315 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 TESCQ96BS2 214 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 ART5Q96L15 291 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 OR10A5Q9H207 317 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 CDCP1Q9H5V8 836 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 ZNF639Q9UID6 485 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 DTX4Q9Y2E6 619 aa16.61■□□□□ 0.25
PDLIM7-202ENST00000355841 A0A1W2PRB8 838 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 TMEM200CA6NKL6 621 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 C6orf47O95873 294 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ABCB1P08183 1280 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 GPC1P35052 558 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 KIR3DL1P43629 444 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ZFP36L2P47974 494 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 STX1BP61266 288 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 RNF4P78317 190 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 JMJD6Q6NYC1 403 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 CAMKMTQ7Z624 323 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ZNF675Q8TD23 568 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 C10orf82Q8WW14 230 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 GAL3ST4Q96RP7 486 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ZBTB18Q99592 522 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 BHLHE41Q9C0J9 482 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ACSS1Q9NUB1 689 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 TP53TG5Q9Y2B4 290 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 BSNQ9UPA5 3926 aa16.6■□□□□ 0.25
PDLIM7-202ENST00000355841 ERVH48-1M5A8F1 160 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ZFAND5O76080 213 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 S100A3P33764 101 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SOX11P35716 441 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 AP2B1P63010 937 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SRSF11Q05519 484 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ACER2Q5QJU3 275 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 FHL5Q5TD97 284 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 H3F3CQ6NXT2 135 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 RPS19BP1Q86WX3 136 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SLC5A8Q8N695 610 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 OR8J2Q8NGG1 315 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 C16orf52Q8NHV5 167 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ELP4Q96EB1 424 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ANKRD10Q9NXR5 420 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 PLA2G3Q9NZ20 509 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 STMN3Q9NZ72 180 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ZIM2Q9NZV7 527 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 WWP2O00308 870 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 CFLARO15519 480 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SCN2BO60939 215 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 DDX5P17844 614 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 CRB2Q5IJ48 1285 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ISLR2Q6UXK2 745 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SPATA21Q7Z572 469 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ZFP28Q8NHY6 868 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SMAD5Q99717 465 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 CCDC167Q9P0B6 97 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ADAM21Q9UKJ8 722 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 TRIM33Q9UPN9 1127 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 MAPRE3Q9UPY8 281 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ERVK-11Q9UQG0 969 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 PCDHGA9Q9Y5G4 932 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 SNX8Q9Y5X2 465 aa16.59■□□□□ 0.25
PDLIM7-202ENST00000355841 ZFYVE26Q68DK2 2539 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 TNRC6AQ8NDV7 1962 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms