RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 A0A1W2PQ09 198 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 FEZF1A0PJY2 475 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 PRAMEF27A3QJZ7 478 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 HIDE1A8MVS5 230 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 CDRT1O95170 752 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 GSTM3P21266 225 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TRA2BP62995 288 aaKnown RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 HNRNPA1L2Q32P51 320 aaKnown RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 FNDC3BQ53EP0 1204 aaKnown RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ZER1Q7Z7L7 766 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 COMTD1Q86VU5 262 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 OR5D16Q8NGK9 328 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 PRRC1Q96M27 445 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 NEDD4LQ96PU5 975 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TPK1Q9H3S4 243 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TRPC4Q9UBN4 977 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TMEM98Q9Y2Y6 226 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 COL4A3Q01955 1670 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 STK25O00506 426 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 HOXC11O43248 304 aaPredicted RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 GPC1P35052 558 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ETV5P41161 510 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 GIPRP48546 466 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ETV1P50549 477 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 SMSP52788 366 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 WNT4P56705 351 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 CDK5Q00535 292 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ASAH1Q13510 395 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ELAVL3Q14576 367 aaKnown RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 GLYR1Q49A26 553 aaPredicted RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TMEM52BQ4KMG9 183 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TCEAL5Q5H9L2 206 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 ATAT1Q5SQI0 421 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 C9orf64Q5T6V5 341 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 C1orf94Q6P1W5 598 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 RTL10Q7L3V2 364 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 IQCHQ86VS3 1027 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 MORN4Q8NDC4 146 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 CREB3L4Q8TEY5 395 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 XAGE5Q8WWM1 108 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 COX14Q96I36 57 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 SNX18Q96RF0 628 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 TMEM245Q9H330 911 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 DDX31Q9H8H2 851 aaKnown RBP17.23■□□□□ 0.35
SPNS3-201ENST00000355530 BCL2L10Q9HD36 194 aa17.23■□□□□ 0.35
SPNS3-201ENST00000355530 FAM172BPA6NC97 362 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TTC36A6NLP5 189 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 H7BY64 318 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 PLD2O14939 933 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ADH1CP00326 375 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TSPAN19P0C672 248 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TRAPPC2P0DI81 140 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TRAPPC2BP0DI82 140 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 NR2F6P10588 404 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 DRD2P14416 443 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TCEA1P23193 301 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 PSMB5P28074 263 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 DDOSTP39656 456 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 RPS5P46782 204 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TGM4P49221 684 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ANXA11P50995 505 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ERVFC1P60507 584 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 EFNB1P98172 346 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 MXD1Q05195 221 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 HNRNPA0Q13151 305 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 DEFB115Q30KQ5 88 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ENTPD8Q5MY95 495 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 XKRXQ6PP77 449 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 FAM131AQ6UXB0 335 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ZNF296Q8WUU4 475 aaPredicted RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 FGF11Q92914 225 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 NXPE3Q969Y0 559 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 AMDHD1Q96NU7 426 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 PRAP1Q96NZ9 151 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 MED18Q9BUE0 208 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 MENTQ9BUN1 341 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 SLC22A4Q9H015 551 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 ZCCHC3Q9NUD5 404 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 MRPS18AQ9NVS2 196 aaKnown RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 N6AMT1Q9Y5N5 214 aa17.22■□□□□ 0.35
SPNS3-201ENST00000355530 SPIN1Q9Y657 262 aaPredicted RBP17.22■□□□□ 0.35
SPNS3-201ENST00000355530 TMEM129A0AVI4 362 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 SNTNA6NMZ2 147 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 CSF2RAP15509 400 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 SLC9A3P48764 834 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 NTHL1P78549 312 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 UBE3AQ05086 875 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 RAB40BQ12829 278 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 GNA13Q14344 377 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 DUSP6Q16828 381 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 DDI2Q5TDH0 399 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 C1orf53Q5VUE5 145 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 FAM46CQ5VWP2 391 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 PLPP4Q5VZY2 271 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 C22orf42Q6IC83 251 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 ADAMTSL4Q6UY14 1074 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 UBE3DQ7Z6J8 389 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 LRRTM4Q86VH4 590 aa17.21■□□□□ 0.35
SPNS3-201ENST00000355530 LAPTM4BQ86VI4 370 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms