RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 OR8J1Q8NGP2 316 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 OR8K5Q8NH50 307 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 SUN3Q8TAQ9 357 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 MGLLQ99685 303 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 NXF2Q9GZY0 626 aaKnown RBP21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 CASC3O15234 703 aaKnown RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 LGI1O95970 557 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 DNTTP04053 509 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 FHP07954 510 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 TGM3Q08188 693 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 LRRC32Q14392 662 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 C19orf48Q6RUI8 117 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 IL17RCQ8NAC3 791 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 TMEM145Q8NBT3 493 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 KLHL6Q8WZ60 621 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 MRPL38Q96DV4 380 aaKnown RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 C11orf16Q9NQ32 467 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 PRDM8Q9NQV8 689 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 GIMAP4Q9NUV9 329 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 RPL36Q9Y3U8 105 aaKnown RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 ATG4BQ9Y4P1 393 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 ENTPD6O75354 484 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 HSMCR30P0CW71 290 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 CSNK2A2P19784 350 aaPredicted RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 MPIP34949 423 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 PRKAG1P54619 331 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 STXBP1P61764 594 aaKnown RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 PRR5P85299 388 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 RHAGQ02094 409 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 HYAL1Q12794 435 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 PIN1Q13526 163 aaPredicted RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 MED22Q15528 200 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 SDE2Q6IQ49 451 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 LACC1Q8IV20 430 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 IL4I1Q96RQ9 567 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 TRMT61BQ9BVS5 477 aaKnown RBP21■□□□□ 0.95
NKX2-1-201ENST00000354822 FBRSQ9HAH7 460 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 PCDHGA4Q9Y5G9 962 aa21■□□□□ 0.95
NKX2-1-201ENST00000354822 GLOD5A6NK44 160 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 K7EQS6 105 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 RFXAPO00287 272 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 CCRL2O00421 344 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 PGRMC2O15173 223 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 NME6O75414 186 aaPredicted RBP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 CSTF2P33240 577 aaKnown RBP eCLIP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 RELAQ04206 551 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 SLC48A1Q6P1K1 146 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 CCDC116Q8IYX3 515 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 NR4A3Q92570 626 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 OR51E2Q9H255 320 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 KCNK12Q9HB15 430 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 OR6C2Q9NZP2 312 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 CES1P1Q9UKY3 287 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 NINQ8N4C6 2090 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 LOC100506127A0A0U1RQW1 187 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 SAGE2PA6NJ88 616 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 NDUFS1P28331 727 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 GPR19Q15760 415 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 OCLNQ16625 522 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 ATAT1Q5SQI0 421 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 PERM1Q5SV97 790 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 RNLSQ5VYX0 342 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 PODNL1Q6PEZ8 512 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 FAM20CQ8IXL6 584 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 FBXL6Q8N531 539 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 WDR36Q8NI36 951 aaKnown RBP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 CNRIP1Q96F85 164 aaPredicted RBP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 TMEM80Q96HE8 168 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 PINK1Q9BXM7 581 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 MKRN2Q9H000 416 aaKnown RBP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 C3orf14Q9HBI5 128 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 LYARQ9NX58 379 aaKnown RBP20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 DOCK9Q9BZ29 2069 aa20.99■□□□□ 0.95
NKX2-1-201ENST00000354822 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 WASHC1A8K0Z3 465 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 EMC8O43402 210 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 AIFM1O95831 613 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 HMGN2P05204 90 aaKnown RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 HOXC4P09017 264 aaPredicted RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 DBTP11182 482 aaKnown RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 NTSR1P30989 418 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 GRK5P34947 590 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 SEC13P55735 322 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 IFITM3Q01628 133 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 LASP1Q14847 261 aaKnown RBP20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 RAB30Q15771 203 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 ZNF425Q6IV72 752 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 WASH2PQ6VEQ5 465 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 PRRC1Q96M27 445 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 WFDC6Q9BQY6 131 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 FBXW2Q9UKT8 454 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 MKLN1Q9UL63 735 aa20.98■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3DA0A087WVF3 549 aa20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3IA0A087WXS9 549 aa20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3EA0A087X179 549 aa20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3KA0A087X1G2 549 aa20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 ISPDA4D126 451 aa20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3FA6NER0 549 aaPredicted RBP20.97■□□□□ 0.95
NKX2-1-201ENST00000354822 TBC1D3LB9A6J9 549 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms