RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SLC36A4Q6YBV0 504 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SYVN1Q86TM6 617 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 OR13H1Q8NG92 308 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 NANPQ8TBE9 248 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TUBGCP3Q96CW5 907 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TMCO6Q96DC7 493 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PDXPQ96GD0 296 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 NECAB3Q96P71 396 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SLC30A2Q9BRI3 323 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 MEAF6Q9HAF1 191 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SEMA4BQ9NPR2 832 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 USE1Q9NZ43 259 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 STOX2Q9P2F5 926 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF222Q9UK12 451 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PLEKHM1Q9Y4G2 1056 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 FXYD1O00168 92 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 RGS10O43665 173 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ERGP11308 486 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ACP5P13686 325 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 BDKRB1P46663 353 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 GNPDA1P46926 289 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SRP54P61011 504 aaKnown RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF45Q02386 682 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ALG11Q2TAA5 492 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 VN1R5Q7Z5H4 357 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 KIF18BQ86Y91 864 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 LRRC56Q8IYG6 542 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 OR6M1Q8NGM8 313 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 OR56A3Q8NH54 315 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 OR5K2Q8NHB8 316 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 GOT1L1Q8NHS2 421 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 C1orf216Q8TAB5 229 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TTC9Q92623 222 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 NTMT1Q9BV86 223 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PPA2Q9H2U2 334 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 AKTIPQ9H8T0 292 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 MID1IP1Q9NPA3 183 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SNTG1Q9NSN8 517 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 HPF1Q9NWY4 346 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ALG5Q9Y673 324 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SPTY2D1-AS1A0A0U1RR47 76 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 A0A1W2PR77 199 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 UPK1AO00322 258 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 FABP7O15540 132 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SNX4O95219 450 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CBX7O95931 251 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 IMPA1P29218 277 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PRDX3P30048 256 aaKnown RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 GDF5P43026 501 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PIK3CGP48736 1102 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CHRNB3Q05901 458 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 RGS1Q08116 209 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TIGD6Q17RP2 521 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ZBTB37Q5TC79 503 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CACHD1Q5VU97 1274 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ATRAIDQ6UW56 229 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 FAM131AQ6UXB0 335 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 RNF165Q6ZSG1 346 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF767PQ75MW2 155 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CYP4Z1Q86W10 505 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 LURAP1LQ8IV03 231 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 TFGQ92734 400 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SGTBQ96EQ0 304 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 MENTQ9BUN1 341 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 CNPPD1Q9BV87 410 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 ZNF416Q9BWM5 594 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 PCDHB16Q9NRJ7 776 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 MGAT4AQ9UM21 535 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 SLCO1B1Q9Y6L6 691 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 HSPE1-MOB4S4R3N1 261 aa9.57□□□□□ -0.88
SYNE1-203ENST00000354674 NUP214P35658 2090 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 B4DXG7 233 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 AZIN1O14977 448 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 NDUFA2O43678 99 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 FCGR1AP12314 374 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 HRH2P25021 359 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 TGFBR2P37173 567 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 KIR2DL3P43628 341 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 FOXA1P55317 472 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 ERVPABLB-1P60509 514 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 DMWDQ09019 674 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 KRR1Q13601 381 aaKnown RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 SGCAQ16586 387 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 GALNT10Q86SR1 603 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 IQCHQ86VS3 1027 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 FNDC5Q8NAU1 212 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 OR52B6Q8NGF0 335 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 OR9A1PQ8NGU1 263 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 NCLNQ969V3 563 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 SPACA7Q96KW9 195 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 NUSAP1Q9BXS6 441 aaKnown RBP9.56□□□□□ -0.88
SYNE1-203ENST00000354674 IPPKQ9H8X2 491 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 SCN3BQ9NY72 215 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 MGAT4BQ9UQ53 548 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 DNAJC15Q9Y5T4 150 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 LYVE1Q9Y5Y7 322 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 WASHC1A8K0Z3 465 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 KIAA0513O60268 411 aa9.56□□□□□ -0.88
SYNE1-203ENST00000354674 SLC16A8O95907 504 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms