RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 S100A5P33763 92 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 CDC20Q12834 499 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 COX10Q12887 443 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 SLAMF1Q13291 335 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 NCF4Q15080 339 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 GPR19Q15760 415 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 MFSD4BQ5TF39 518 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 ABHD17CQ6PCB6 329 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 PODNL1Q6PEZ8 512 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 ZBTB8BQ8NAP8 495 aaPredicted RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 SUN3Q8TAQ9 357 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 TRNT1Q96Q11 434 aaKnown RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 MAN2C1Q9NTJ4 1040 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 DNAJC27Q9NZQ0 273 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 RPL36Q9Y3U8 105 aaKnown RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 PEX16Q9Y5Y5 336 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 WASHC1A8K0Z3 465 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 HAT1O14929 419 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 ERI3O43414 337 aaKnown RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 KIAA0513O60268 411 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 APODP05090 189 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 CHRM4P08173 479 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 ENDOUP21128 410 aaKnown RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 ETV6P41212 452 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 GNA13Q14344 377 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 WASH2PQ6VEQ5 465 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 CADM3Q8N126 398 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 CYP4Z2PQ8N1L4 340 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 MOAP1Q96BY2 351 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 CNRIP1Q96F85 164 aaPredicted RBP20.88■□□□□ 0.93
UPF3A-201ENST00000351487 TMEM80Q96HE8 168 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 PRRC1Q96M27 445 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 KCNK12Q9HB15 430 aa20.88■□□□□ 0.93
UPF3A-201ENST00000351487 A0A1W2PR48 441 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 CASC3O15234 703 aaKnown RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 LGI1O95970 557 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 CA3P07451 260 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 ATP5A1P25705 553 aaKnown RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 RPS21P63220 83 aaKnown RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 ZNF91Q05481 1191 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 PRAMEF8Q5VWM4 474 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 PRAMEF7Q5VXH5 474 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 WDR53Q7Z5U6 358 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 ACOT4Q8N9L9 421 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 OR2L5Q8NG80 312 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 OR2L3Q8NG85 312 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 OR8K5Q8NH50 307 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 FNDC11Q9BVV2 318 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 SCHIP1Q9P0W5 487 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-201ENST00000351487 ATG4BQ9Y4P1 393 aa20.87■□□□□ 0.93
UPF3A-201ENST00000351487 SOX6P35712 828 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 UAP1L1Q3KQV9 507 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 SLC25A30Q5SVS4 291 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 KIAA1211LQ6NV74 962 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 NUDT18Q6ZVK8 323 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 FAM20CQ8IXL6 584 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 OR56A1Q8NGH5 318 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 KLK6Q92876 244 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 FAM210AQ96ND0 272 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 POLDIP3Q9BY77 421 aaKnown RBP20.86■□□□□ 0.93
UPF3A-201ENST00000351487 CPNE5Q9HCH3 593 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 HHATLQ9HCP6 504 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 WBP1LQ9NX94 342 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 PLEKHM1Q9Y4G2 1056 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 GLOD5A6NK44 160 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 OR52A4PA6NMU1 304 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 HOXB3P14651 431 aaPredicted RBP20.86■□□□□ 0.93
UPF3A-201ENST00000351487 MMP11P24347 488 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 TSFMP43897 325 aaKnown RBP20.86■□□□□ 0.93
UPF3A-201ENST00000351487 KRT33BQ14525 404 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 FBXL6Q8N531 539 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 FAM26EQ8N5C1 309 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
UPF3A-201ENST00000351487 MORN4Q8NDC4 146 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 OR4K5Q8NGD3 323 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 OR6T1Q8NGN1 323 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 PLA2G2FQ9BZM2 168 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 POLE4Q9NR33 117 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 ABCB10Q9NRK6 738 aa20.86■□□□□ 0.93
UPF3A-201ENST00000351487 A0A0G2JPF8 293 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 HNRNPCL2B2RXH8 293 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 HNRNPCL3B7ZW38 293 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 PGRMC2O15173 223 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 CSO75390 466 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 ERAL1O75616 437 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 AIFM1O95831 613 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 HMGN2P05204 90 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 FHP07954 510 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 HNRNPCL4P0DMR1 293 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 PEBP1P30086 187 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 IGFALSP35858 605 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 MAN2A2P49641 1150 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 CBX3Q13185 183 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 SGCGQ13326 291 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 LASP1Q14847 261 aaKnown RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 ZNF776Q68DI1 518 aaPredicted RBP20.85■□□□□ 0.93
UPF3A-201ENST00000351487 C1orf94Q6P1W5 598 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 ZER1Q7Z7L7 766 aa20.85■□□□□ 0.93
UPF3A-201ENST00000351487 PARP16Q8N5Y8 322 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms