RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CCT7Q99832 543 aa20.45■□□□□ 0.86
SNX3-202ENST00000349379 OR10A5Q9H207 317 aa20.45■□□□□ 0.86
SNX3-202ENST00000349379 ZNF395Q9H8N7 513 aaPredicted RBP20.45■□□□□ 0.86
SNX3-202ENST00000349379 SLC35C2Q9NQQ7 365 aa20.45■□□□□ 0.86
SNX3-202ENST00000349379 A8MVJ9 347 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 HSPA4LO95757 839 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 CRYABP02511 175 aaKnown RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 EDN3P14138 238 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 SDC1P18827 310 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 RPL38P63173 70 aaKnown RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 PMP22Q01453 160 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 DUSP8Q13202 625 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 MRPL49Q13405 166 aaKnown RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 MDGA2Q7Z553 956 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 SLC15A4Q8N697 577 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 ZNF781Q8N8C0 355 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 ANKRD42Q8N9B4 389 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 TMEM125Q96AQ2 219 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 EXOSC8Q96B26 276 aaKnown RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 ZNF764Q96H86 408 aaPredicted RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 EGLN2Q96KS0 407 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 PPP3R2Q96LZ3 170 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 C3orf30Q96M34 536 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 FRMD6Q96NE9 622 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 OLAHQ9NV23 265 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 HPF1Q9NWY4 346 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.44■□□□□ 0.86
SNX3-202ENST00000349379 RAP2CQ9Y3L5 183 aa20.44■□□□□ 0.86
SNX3-202ENST00000349379 NINQ8N4C6 2090 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 CBX7O95931 251 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 PTGER1P34995 402 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 SLC1A6P48664 564 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 GTF3C1Q12789 2109 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 LTB4RQ15722 352 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 MAPKAPK3Q16644 382 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 ZNF628Q5EBL2 1059 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 C6orf163Q5TEZ5 329 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 OPN5Q6U736 354 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 TICAM1Q8IUC6 712 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 CCDC116Q8IYX3 515 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 ADCY4Q8NFM4 1077 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 SLC22A8Q8TCC7 542 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 ADIPOR1Q96A54 375 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 TP53INP1Q96A56 240 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 ARL8AQ96BM9 186 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 BRINP2Q9C0B6 783 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 ENTPD4Q9Y227 616 aa20.43■□□□□ 0.86
SNX3-202ENST00000349379 KLF13Q9Y2Y9 288 aaPredicted RBP20.43■□□□□ 0.86
SNX3-202ENST00000349379 MYO1GB0I1T2 1018 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 MST1P26927 711 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 GALNTL6Q49A17 601 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 HHATQ5VTY9 493 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 IL20RBQ6UXL0 311 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 GOLM1Q8NBJ4 401 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 FAM98AQ8NCA5 519 aaKnown RBP20.42■□□□□ 0.86
SNX3-202ENST00000349379 PSD4Q8NDX1 1056 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 SIMC1Q8NDZ2 872 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 C17orf47Q8NEP4 570 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 C16orf52Q8NHV5 167 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 CDC26Q8NHZ8 85 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 ERP27Q96DN0 273 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 GAL3ST4Q96RP7 486 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 TIMMDC1Q9NPL8 285 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 MIEF1Q9NQG6 463 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 GIMAP4Q9NUV9 329 aa20.42■□□□□ 0.86
SNX3-202ENST00000349379 C2orf92A0A1B0GVN3 265 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 ANKUB1A6NFN9 424 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 TBX19O60806 448 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 SKAP2O75563 359 aaPredicted RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 JUNP05412 331 aaKnown RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 SRSF1Q07955 248 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNX3-202ENST00000349379 BST1Q10588 318 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 STX3Q13277 289 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 ZNF791Q3KP31 576 aaPredicted RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 TRMT12Q53H54 448 aaKnown RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 C6orf136Q5SQH8 315 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 RTL4Q6ZR62 310 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 OR9A2Q8NGT5 310 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 SGCZQ96LD1 299 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 SH2D2AQ9NP31 389 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 ARGLU1Q9NWB6 273 aaPredicted RBP20.41■□□□□ 0.86
SNX3-202ENST00000349379 GIMAP2Q9UG22 337 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 ERVK-11Q9UQG0 969 aa20.41■□□□□ 0.86
SNX3-202ENST00000349379 ATP6AP2A0A1C7CYW4 349 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 ATP6AP2O75787 350 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 FBXO45P0C2W1 286 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 BCKDHAP12694 445 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 PCSK2P16519 638 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 GPX3P22352 226 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 MRPS35P82673 323 aaKnown RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 PDE7AQ13946 482 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 EXOSC7Q15024 291 aaKnown RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 SULF2Q8IWU5 870 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 DND1Q8IYX4 353 aaKnown RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 KIRREL3Q8IZU9 778 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 CPSF7Q8N684 471 aaKnown RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 POGLUT1Q8NBL1 392 aa20.4■□□□□ 0.86
SNX3-202ENST00000349379 SPACA9Q96E40 222 aaPredicted RBP20.4■□□□□ 0.86
SNX3-202ENST00000349379 TSSK3Q96PN8 268 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms