RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SAXO2Q658L1 398 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM205Q6UW68 189 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 LANCL3Q6ZV70 420 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 MOAP1Q96BY2 351 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 NEURL3Q96EH8 262 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 CDRT15Q96T59 188 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 FAM117AQ9C073 453 aa25.29■■□□□ 1.64
SSBP4-202ENST00000348495 PTRH2Q9Y3E5 179 aaKnown RBP25.29■■□□□ 1.64
SSBP4-202ENST00000348495 UPK1AO00322 258 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 NME4O00746 187 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 S1PR1P21453 382 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 MVDP53602 400 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 BNC2Q6ZN30 1099 aaPredicted RBP25.28■■□□□ 1.64
SSBP4-202ENST00000348495 ANKRD37Q7Z713 158 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 SH3GL1Q99961 368 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 ANKRA2Q9H9E1 313 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 GPATCH2Q9NW75 528 aa25.28■■□□□ 1.64
SSBP4-202ENST00000348495 PRPF19Q9UMS4 504 aaKnown RBP25.28■■□□□ 1.64
SSBP4-202ENST00000348495 C21orf140B9A014 251 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 EMC8O43402 210 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 BRINP1O60477 761 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 SPDYE7PQ495Y7 208 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 VWA5B2Q8N398 1253 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 DOK4Q8TEW6 326 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 METTL21AQ8WXB1 218 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 NKD1Q969G9 470 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 TMEM121BQ9BXQ6 578 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-202ENST00000348495 PNO1Q9NRX1 252 aaKnown RBP25.27■■□□□ 1.64
SSBP4-202ENST00000348495 THSD1Q9NS62 852 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 ZCCHC3Q9NUD5 404 aaKnown RBP25.27■■□□□ 1.64
SSBP4-202ENST00000348495 C19orf53Q9UNZ5 99 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-202ENST00000348495 PADI2Q9Y2J8 665 aa25.27■■□□□ 1.64
SSBP4-202ENST00000348495 C17orf105B2RV13 164 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 GPX2P18283 190 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 PPIBP23284 216 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 PRR5P85299 388 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 FAAH2Q6GMR7 532 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 C6orf120Q7Z4R8 191 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 SIMC1Q8NDZ2 872 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 MESP1Q9BRJ9 268 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 THTPAQ9BU02 230 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 GPR87Q9BY21 358 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 KAT8Q9H7Z6 458 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 C3orf14Q9HBI5 128 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 TCFL5Q9UL49 500 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 FARSAQ9Y285 508 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 TRABD2BA6NFA1 517 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 PSMG1O95456 288 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 CHI3L1P36222 383 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 VAC14Q08AM6 782 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 FUT7Q11130 342 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 DNASE1L3Q13609 305 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 ARHGAP24Q8N264 748 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 C10orf111Q8N326 155 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 OR56A1Q8NGH5 318 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 PNPT1Q8TCS8 783 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 NXPE2Q96DL1 559 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 GIMAP5Q96F15 307 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 MAGED4Q96JG8 741 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 ZNF578Q96N58 590 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 THUMPD3Q9BV44 507 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 DDX18Q9NVP1 670 aaKnown RBP25.26■■□□□ 1.63
SSBP4-202ENST00000348495 ADA2Q9NZK5 511 aa25.26■■□□□ 1.63
SSBP4-202ENST00000348495 HRKO00198 91 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 KRT75O95678 551 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 CBX7O95931 251 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 F8A1P23610 371 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 FOLR3P41439 243 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 PIGGQ5H8A4 983 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 BHLHB9Q6PI77 547 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 OR52N2Q8NGI0 321 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 CD300AQ9UGN4 299 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 L3MBTL1Q9Y468 752 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 AK5Q9Y6K8 562 aa25.25■■□□□ 1.63
SSBP4-202ENST00000348495 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.25■■□□□ 1.63
SSBP4-202ENST00000348495 LOC102723996A0A087X1L8 192 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 LOC101059948A0A1B0GTJ6 334 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 EVPLLA8MZ36 301 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 TNNI3P19429 210 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 PGM1P36871 562 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 DLSTP36957 453 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 OR4D2P58180 307 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 DUSP8Q13202 625 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 TP53BP2Q13625 1128 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 CEACAM7Q14002 265 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 ZNF267Q14586 743 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-202ENST00000348495 SFT2D3Q587I9 215 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 PGM2L1Q6PCE3 622 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 RNF130Q86XS8 419 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 NUP43Q8NFH3 380 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 OR14A16Q8NHC5 309 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 CLPTM1LQ96KA5 538 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 MMADHCQ9H3L0 296 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-202ENST00000348495 CORO2BQ9UQ03 480 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 AP3M1Q9Y2T2 418 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 SPTBN4Q9H254 2564 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 SPTBN2O15020 2390 aa25.24■■□□□ 1.63
SSBP4-202ENST00000348495 PRORSD1PA6NEY8 169 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 PCDH17O14917 1159 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms