RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 OR52E4Q8NGH9 312 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 IL4I1Q96RQ9 567 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 TMEM38AQ9H6F2 299 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 SPACA6W5XKT8 324 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 TRBV4-1A0A0J9YWV2 114 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 CLDN24A6NM45 220 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 EXOSC7Q15024 291 aaKnown RBP16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 PITHD1Q9GZP4 211 aaPredicted RBP16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 POT1Q9NUX5 634 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 NDUFA13Q9P0J0 144 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 ADAM29Q9UKF5 820 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
SMARCC2-202ENST00000347471 CYP7B1O75881 506 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 KHKP50053 298 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CHRNEQ04844 493 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SLC13A2Q13183 592 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 TRMT12Q53H54 448 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 BHLHB9Q6PI77 547 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ABHD13Q7L211 337 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 AHCYL2Q96HN2 611 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PIP5K1AQ99755 562 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SPATA9Q9BWV2 254 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CACYBPQ9HB71 228 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SCN3BQ9NY72 215 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ERVK-18Q9QC07 812 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 TNRC18O15417 2968 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SLC1A7O00341 560 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CASC3O15234 703 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PRKNO60260 465 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CCNB2O95067 398 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 WNT1P04628 370 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 IGFBP1P08833 259 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CTSKP43235 329 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 HNRNPFP52597 415 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PUM1Q14671 1186 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■□□ 15.5
SMARCC2-202ENST00000347471 SYT16Q17RD7 645 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 B3GNT6Q6ZMB0 384 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 GPR155Q7Z3F1 870 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SUN3Q8TAQ9 357 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ASB12Q8WXK4 309 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CDX2Q99626 313 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 MAU2Q9Y6X3 613 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 OR2A25A4D2G3 310 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 A6NCN8 305 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 UGT2B11O75310 529 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 TFPTP0C1Z6 253 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ARL4DP49703 201 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 TSEN54Q7Z6J9 526 aaKnown RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 VRK2Q86Y07 508 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 APLFQ8IW19 511 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 CACTIN-AS1Q8N1I8 211 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 SETD9Q8NE22 299 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 GPBAR1Q8TDU6 330 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PEX11GQ96HA9 241 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 NODALQ96S42 347 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 FNDC11Q9BVV2 318 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ACSS1Q9NUB1 689 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 ENPP4Q9Y6X5 453 aa16.16■□□□□ 0.18
SMARCC2-202ENST00000347471 PRAMEF27A3QJZ7 478 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 ZSCAN9O15535 394 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 FCMRO60667 390 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF217O75362 1048 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 FHP07954 510 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF10P21506 573 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 LIM2P55344 173 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 GFERP55789 205 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 LSM11P83369 360 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 CDK5R2Q13319 367 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 FIGNL1Q6PIW4 674 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 RRM2BQ7LG56 351 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 LRRC25Q8N386 305 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 GPR32P1Q8NGA4 272 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 NMNAT1Q9HAN9 279 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 TSC22D4Q9Y3Q8 395 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 KIAA1549LQ6ZVL6 1849 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 A0A0J9YY10 115 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 CPSF4LA6NMK7 179 aaKnown RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 UGT2B17O75795 530 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 NTN1O95631 604 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 CHRM4P08173 479 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 CRHBPP24387 322 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 PGDP52209 483 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 TARDBPQ13148 414 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 ZNF311Q5JNZ3 666 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 KLHL17Q6TDP4 642 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 USP51Q70EK9 711 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 OR7G2Q8NG99 324 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 OTULINQ96BN8 352 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 NPLQ9BXD5 320 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 CEPT1Q9Y6K0 416 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 TMEM229AB2RXF0 380 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 PDE9AO76083 593 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 ISL1P61371 349 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 KCNAB1Q14722 419 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 DCST1Q5T197 706 aa16.15■□□□□ 0.18
SMARCC2-202ENST00000347471 KDM4DQ6B0I6 523 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms