RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 ZNF366Q8N895 744 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ELMOD3Q96FG2 381 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 CDC7O00311 574 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 KCNJ13O60928 360 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SLC22A5O76082 557 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 RPP14O95059 124 aaKnown RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 MAL2Q969L2 176 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF736B4DX44 427 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 NDUFV1P49821 464 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 DGKQP52824 942 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PSPHP78330 225 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ECM1Q16610 540 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PLAG1Q6DJT9 500 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SLCO5A1Q9H2Y9 848 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 NLE1Q9NVX2 485 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ZFP37Q9Y6Q3 630 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GJB1P08034 283 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GNRHRP30968 328 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 KLF1Q13351 362 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GBX1Q14549 363 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GFOD2Q3B7J2 385 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 UAP1L1Q3KQV9 507 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SERPINA11Q86U17 422 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SLC9B2Q86UD5 537 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CMIPQ8IY22 773 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 OR4K14Q8NGD5 310 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 KIAA1143Q96AT1 154 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PLEKHM1Q9Y4G2 1056 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 TLL1O43897 1013 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 VEGFDO43915 354 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PCCBP05166 539 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 KDELC1Q6UW63 502 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 TXNDC5Q8NBS9 432 aaKnown RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 WDR26Q9H7D7 661 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 EDDM13A0A1B0GTR0 161 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 AGXTP21549 392 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 MALLQ13021 153 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GDPD4Q6W3E5 623 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 OR6T1Q8NGN1 323 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 GRHL3Q8TE85 626 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 NT5C3BQ969T7 300 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 RPS10P5Q9NQ39 176 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 BTBD17A6NE02 478 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 PTERQ96BW5 349 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF597Q96LX8 424 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 HSD3B7Q9H2F3 369 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ADAP2Q9NPF8 381 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 IL36AQ9UHA7 158 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 LCMT2O60294 686 aaKnown RBP12.74□□□□□ -0.37
COL6A3-202ENST00000347401 HTR3BO95264 441 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CREB1P16220 341 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 MAP2K4P45985 399 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 TAS2R46P59540 309 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 VEZF1Q14119 521 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 ERVK13-1Q9NX77 482 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 CD300AQ9UGN4 299 aa12.74□□□□□ -0.37
COL6A3-202ENST00000347401 TUBGCP6Q96RT7 1819 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 KCNQ2O43526 872 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 UBL4AP11441 157 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PPP3CBP16298 524 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SHFQ7M4L6 423 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 OR8S1Q8NH09 359 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 L3HYPDHQ96EM0 354 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PCTPQ9UKL6 214 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SBK2P0C263 348 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 FGF3P11487 239 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CLDN8P56748 225 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PCK2Q16822 640 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CARD16Q5EG05 197 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ENPP7Q6UWV6 458 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 UFSP2Q9NUQ7 469 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SLC22A14Q9Y267 594 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 A3GALT2U3KPV4 340 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ERI3O43414 337 aaKnown RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CD48P09326 243 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 CTHP32929 405 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 RAB4BP61018 213 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms