RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LOC105369274A0A096LPK9 316 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 KIR2DS5A0A0G2JLQ3 304 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 A0A0G2JNG1 304 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 LOC102723532A0A0G2JNH3 316 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 KIR2DS3K7RE56 304 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ERAL1O75616 437 aaKnown RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 AIFM1O95831 613 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ALPPL2P10696 532 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 TYRP1P17643 537 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 PRKACGP22612 351 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 CD27P26842 260 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 NUDT1P36639 197 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 DCTP40126 519 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 STXBP1P61764 594 aaKnown RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 KCNJ10P78508 379 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 CDK6Q00534 326 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 DUSP2Q05923 314 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 KIR2DS5Q14953 304 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 SAXO2Q658L1 398 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 FRMPD2BQ6IN97 320 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 TNFAIP8L2Q6P589 184 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 SPESP1Q6UW49 350 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ZDHHC13Q8IUH4 622 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ADHFE1Q8IWW8 467 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ST13P4Q8IZP2 240 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 OFCC1Q8IZS5 231 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 OR4N4Q8N0Y3 316 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 HORMAD2Q8N7B1 307 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ZCCHC10Q8TBK6 192 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 UTP15Q8TED0 518 aaKnown RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ZFPM2Q8WW38 1151 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 TAMM41Q96BW9 452 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 NEURL3Q96EH8 262 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ZBED6CLQ96FA7 236 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF764Q96H86 408 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 AMDHD1Q96NU7 426 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 OR2A5Q96R48 311 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 MAPKAP1Q9BPZ7 522 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 FAIM2Q9BWQ8 316 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM38AQ9H6F2 299 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 SLC35C2Q9NQQ7 365 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 TAS2R7Q9NYW3 318 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 PADI4Q9UM07 663 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 PCDHGA2Q9Y5H1 932 aa8.71□□□□□ -1.02
ATG4A-202ENST00000345734 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 A0A1W2PR77 199 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 OR5K4A6NMS3 321 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 C2orf74A8MZ97 194 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 M0QX08 132 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 SUV39H1O43463 412 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 DNAJB6O75190 326 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 TNFAIP8O95379 198 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 FABP3P05413 133 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 C8orf89P0DMQ9 161 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 TNFRSF1BP20333 461 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 MYF6P23409 242 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 CAPGP40121 348 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 BLKP51451 505 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 NCBP2P52298 156 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATG4A-202ENST00000345734 MAZP56270 477 aaKnown RBP8.7□□□□□ -1.02
ATG4A-202ENST00000345734 DSTNP60981 165 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 HHEXQ03014 270 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 RGS1Q08116 209 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 SPDYE7PQ495Y7 208 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 CYP27C1Q4G0S4 372 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 KRT80Q6KB66 452 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 CEACAM20Q6UY09 585 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM26Q6ZUK4 368 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 CEP68Q76N32 757 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 C6orf120Q7Z4R8 191 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 SHISA5Q8N114 240 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 NATD1Q8N6N6 113 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 OR5K1Q8NHB7 308 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 NT5CQ8TCD5 201 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 RSC1A1Q92681 617 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 POP5Q969H6 163 aaKnown RBP8.7□□□□□ -1.02
ATG4A-202ENST00000345734 TM4SF19Q96DZ7 209 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 SERHL2Q9H4I8 314 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF696Q9H7X3 374 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 ACSS1Q9NUB1 689 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-202ENST00000345734 PILRAQ9UKJ1 303 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 CES1P1Q9UKY3 287 aa8.7□□□□□ -1.02
ATG4A-202ENST00000345734 MYO1GB0I1T2 1018 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 H0YGG7 62 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TMPRSS2O15393 492 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PROM1O43490 865 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PGM3O95394 542 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 THRBP10828 461 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 DDX5P17844 614 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ENDOUP21128 410 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CD38P28907 300 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 NTF4P34130 210 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 FEN1P39748 380 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CCT3P49368 545 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ARF3P61204 181 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SELENOWP63302 87 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms