RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR6C76A6NM76 312 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 MYO1GB0I1T2 1018 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ZNF195O14628 629 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 PDPK1O15530 556 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 DPM1O60762 260 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 DDAH2O95865 285 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 GPC1P35052 558 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 IDH3AP50213 366 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 DIO3P55073 304 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 C21orf58P58505 322 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 RAPSNQ13702 412 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 PDE7AQ13946 482 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 CEBPEQ15744 281 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
SNCA-202ENST00000345009 SLC9B1Q4ZJI4 515 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ACER2Q5QJU3 275 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 HLA-DQA1Q5Y7H0 255 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 H3F3CQ6NXT2 135 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ASB18Q6ZVZ8 466 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 HORMAD2Q8N7B1 307 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 GLB1L3Q8NCI6 653 aaPredicted RBP11.02□□□□□ -0.65
SNCA-202ENST00000345009 APCDD1LQ8NCL9 501 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 SEMA4CQ9C0C4 833 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 SLC25A18Q9H1K4 315 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 RABEP2Q9H5N1 569 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ZNF552Q9H707 407 aaPredicted RBP11.02□□□□□ -0.65
SNCA-202ENST00000345009 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ACSS1Q9NUB1 689 aaPredicted RBP11.02□□□□□ -0.65
SNCA-202ENST00000345009 AIG1Q9NVV5 245 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 PRODH2Q9UF12 536 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 PCDHGB4Q9UN71 923 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 ERVK-19Q9WJR5 959 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 BOD1L1Q8NFC6 3051 aa11.02□□□□□ -0.65
SNCA-202ENST00000345009 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.65
SNCA-202ENST00000345009 DOCK10Q96BY6 2186 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ATRXP46100 2492 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 A0A0G2JND7 137 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
SNCA-202ENST00000345009 MASP2O00187 686 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ATXN7O15265 892 aaPredicted RBP11.01□□□□□ -0.65
SNCA-202ENST00000345009 PRAMEF2O60811 474 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 SLC22A3O75751 556 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 CASRP41180 1078 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 GPR143P51810 404 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 RNF4P78317 190 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 LRRC74AQ0VAA2 488 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 FUT7Q11130 342 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 MFAP5Q13361 173 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 PRICKLE4Q2TBC4 344 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ZNF750Q32MQ0 723 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 PGS1Q32NB8 556 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ANXA8L1Q5VT79 327 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 METTL21CQ5VZV1 264 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 LINC00696Q6ZRV3 163 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 MIER2Q8N344 545 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 SUN3Q8TAQ9 357 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 ZNF721Q8TF20 911 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 COQ8BQ96D53 544 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 AMDHD1Q96NU7 426 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 NUDT9Q9BW91 350 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 BHLHE41Q9C0J9 482 aaPredicted RBP11.01□□□□□ -0.65
SNCA-202ENST00000345009 OR10A5Q9H207 317 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 C3orf14Q9HBI5 128 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 FGFR1OP2Q9NVK5 253 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 BCAP29Q9UHQ4 241 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
SNCA-202ENST00000345009 EXO1Q9UQ84 846 aaKnown RBP11.01□□□□□ -0.65
SNCA-202ENST00000345009 YARS2Q9Y2Z4 477 aaKnown RBP11.01□□□□□ -0.65
SNCA-202ENST00000345009 A0A087WV62 115 aa11□□□□□ -0.65
SNCA-202ENST00000345009 C2orf92A0A1B0GVN3 265 aa11□□□□□ -0.65
SNCA-202ENST00000345009 A0A1W2PRB8 838 aa11□□□□□ -0.65
SNCA-202ENST00000345009 PLOD3O60568 738 aa11□□□□□ -0.65
SNCA-202ENST00000345009 COQ9O75208 318 aa11□□□□□ -0.65
SNCA-202ENST00000345009 IGKV3-11P04433 115 aa11□□□□□ -0.65
SNCA-202ENST00000345009 CELA2AP08217 269 aa11□□□□□ -0.65
SNCA-202ENST00000345009 IFI6P09912 130 aa11□□□□□ -0.65
SNCA-202ENST00000345009 S100A3P33764 101 aa11□□□□□ -0.65
SNCA-202ENST00000345009 KIR3DL1P43629 444 aa11□□□□□ -0.65
SNCA-202ENST00000345009 NRG3P56975 720 aa11□□□□□ -0.65
SNCA-202ENST00000345009 PSPHP78330 225 aa11□□□□□ -0.65
SNCA-202ENST00000345009 ARG2P78540 354 aa11□□□□□ -0.65
SNCA-202ENST00000345009 MLC1Q15049 377 aa11□□□□□ -0.65
SNCA-202ENST00000345009 PDCD4Q53EL6 469 aaKnown RBP11□□□□□ -0.65
SNCA-202ENST00000345009 ANKRD26P1Q6NSI1 321 aa11□□□□□ -0.65
SNCA-202ENST00000345009 FAM180BQ6P0A1 224 aa11□□□□□ -0.65
SNCA-202ENST00000345009 BHLHB9Q6PI77 547 aa11□□□□□ -0.65
SNCA-202ENST00000345009 IGFL3Q6UXB1 125 aa11□□□□□ -0.65
SNCA-202ENST00000345009 MAVSQ7Z434 540 aa11□□□□□ -0.65
SNCA-202ENST00000345009 RIMKLAQ8IXN7 391 aa11□□□□□ -0.65
SNCA-202ENST00000345009 KIF2BQ8N4N8 673 aa11□□□□□ -0.65
SNCA-202ENST00000345009 TMEM156Q8N614 296 aa11□□□□□ -0.65
SNCA-202ENST00000345009 KRTCAP2Q8N6L1 136 aa11□□□□□ -0.65
SNCA-202ENST00000345009 TEX19Q8NA77 164 aa11□□□□□ -0.65
SNCA-202ENST00000345009 ADCY4Q8NFM4 1077 aa11□□□□□ -0.65
SNCA-202ENST00000345009 OR7A2PQ8NGA2 310 aa11□□□□□ -0.65
SNCA-202ENST00000345009 OR9A2Q8NGT5 310 aa11□□□□□ -0.65
SNCA-202ENST00000345009 NUBPLQ8TB37 319 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms