RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ENTPD6O75354 484 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PEX14O75381 377 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CBX7O95931 251 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF806P0C7X5 589 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 EBLN1P0CF75 366 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 BCKDHAP12694 445 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SMPD1P17405 629 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ENGP17813 658 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CXCL3P19876 107 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 NFYAP23511 347 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 S100A11P31949 105 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CNR2P34972 360 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 AVPR1BP47901 424 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PITPNBP48739 271 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DAOAP59103 153 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SELENOWP63302 87 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 RBBP4Q09028 425 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PLD1Q13393 1074 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PUM1Q14671 1186 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 HEPACAMQ14CZ8 416 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TAF1AQ15573 450 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GSG1Q2KHT4 349 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 FAM76BQ5HYJ3 339 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 MANEALQ5VSG8 457 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 LRRTM3Q86VH5 581 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PTOV1Q86YD1 416 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 RNF113BQ8IZP6 322 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SVBPQ8N300 66 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TOMM5Q8N4H5 51 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SPICQ8N5J4 248 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 KRTCAP2Q8N6L1 136 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 C11orf65Q8NCR3 313 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GPR26Q8NDV2 337 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 COQ8AQ8NI60 647 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CSGALNACT1Q8TDX6 532 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GANCQ8TET4 914 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ZDHHC1Q8WTX9 485 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GEMIN6Q8WXD5 167 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ASB13Q8WXK3 278 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 KAT2AQ92830 837 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 MRPS24Q96EL2 167 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 LINGO1Q96FE5 620 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CDK15Q96Q40 435 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TRIB3Q96RU7 358 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GPR21Q99679 349 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PTDSS2Q9BVG9 487 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TSSK6Q9BXA6 273 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SAP130Q9H0E3 1048 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ESRP2Q9H6T0 727 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 IPPKQ9H8X2 491 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SLC6A13Q9NSD5 602 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SPHK1Q9NYA1 384 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 EXOSC1Q9Y3B2 195 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SYN3O14994 580 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SOD1P00441 154 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 HRGP04196 525 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 OSMP13725 252 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DRD2P14416 443 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CPN1P15169 458 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 BPIP17213 487 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PRPH2P23942 346 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 BTCP35070 178 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CLCN7P51798 805 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TAP2Q03519 686 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 MTAPQ13126 283 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 LRRC32Q14392 662 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ZRANB3Q5FWF4 1079 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TEX30Q5JUR7 227 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 SLC25A30Q5SVS4 291 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 FRMPD2BQ6IN97 320 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 KANSL1Q7Z3B3 1105 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 TMPRSS9Q7Z410 1059 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PAQR7Q86WK9 346 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GPR65Q8IYL9 337 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 C10orf111Q8N326 155 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 B3GALNT2Q8NCR0 500 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ARRDC4Q8NCT1 418 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 FAM71CQ8NEG0 241 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DBF4BQ8NFT6 615 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 OR1S1Q8NH92 325 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 ZDHHC12Q96GR4 267 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 NECAB3Q96P71 396 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PCYT2Q99447 389 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PIP5K1AQ99755 562 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 INPP5KQ9BT40 448 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CACNG6Q9BXT2 260 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 OSGEPL1Q9H4B0 414 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 MTG2Q9H4K7 406 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 METTL17Q9H7H0 456 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 DDX31Q9H8H2 851 aaKnown RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 BRD9Q9H8M2 597 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CYSLTR2Q9NS75 346 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 NDUFAF4Q9P032 175 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 AKAP7Q9P0M2 348 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-201ENST00000343524 CPA4Q9UI42 421 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 FBXL2Q9UKC9 423 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms