RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 A0A075B6Q4 140 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 FAM25EA8MYX2 175 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MID1O15344 667 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MRPL3P09001 348 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 PTGER1P34995 402 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MAP2K3P46734 347 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 DAPP51397 102 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 POU6F2P78424 691 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 RUNX3Q13761 415 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 AMIGO1Q86WK6 493 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 Q8N402 240 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 DUS3LQ96G46 650 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 C1QTNF3Q9BXJ4 246 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PDFQ9HBH1 243 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ABLIM3O94929 683 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PTTG1O95997 202 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TACSTD2P09758 323 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GIMD1P0DJR0 217 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GPR4P46093 362 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PRLHRP49683 370 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CAMK1Q14012 370 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 MBTPS1Q14703 1052 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SHFQ7M4L6 423 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 KLBQ86Z14 1044 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 LRRC25Q8N386 305 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 LILRA3Q8N6C8 439 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 WBP2Q969T9 261 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 WDR92Q96MX6 357 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TM9SF2Q99805 663 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 RBCK1Q9BYM8 510 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TBL1XR1Q9BZK7 514 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CHIAQ9BZP6 476 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ABCG5Q9H222 651 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 STUB1Q9UNE7 303 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 BLOC1S5-TXNDC5H3BN57 136 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CTDSP2O14595 271 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 FLRT2O43155 660 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SEMA3DO95025 777 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CDK1P06493 297 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ZNF24P17028 368 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GIPRP48546 466 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 DNASE1L1P49184 302 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 BHLHA9Q7RTU4 235 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SLITRK4Q8IW52 837 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 NLGN4XQ8N0W4 816 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SIX5Q8N196 739 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PROKR2Q8NFJ6 384 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TMEM246Q9BRR3 403 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CCDC59Q9P031 241 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 SLC16A6O15403 523 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 KLHL18O94889 574 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 IL1RNP18510 177 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GABRA3P34903 492 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TGFBR2P37173 567 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 RNF144AP50876 292 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 PPP2R2DQ66LE6 453 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 LCTLQ6UWM7 567 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GID4Q8IVV7 300 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 HCAR2Q8TDS4 363 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 METTL21AQ8WXB1 218 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GGHQ92820 318 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MACROD1Q9BQ69 325 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 FUZQ9BT04 418 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TAPBPLQ9BX59 468 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 DPAGT1Q9H3H5 408 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 BEX1Q9HBH7 125 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TMEM184CQ9NVA4 438 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CACNA1CQ13936 2221 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 A0A0G2JPF8 293 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 AGAP5A6NIR3 686 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ZNF879B4DU55 563 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 HNRNPCL3B7ZW38 293 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 IGLV3-27P01718 113 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 HNRNPCL4P0DMR1 293 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ARAFP10398 606 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 GNALP38405 381 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 STARP49675 285 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 NKX2-5P52952 324 aaPredicted RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 TAS2R43P59537 309 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 WDR5P61964 334 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 PPP3R1P63098 170 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PNCKQ6P2M8 343 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SLC9B2Q86UD5 537 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 MUL1Q969V5 352 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 NELL2Q99435 816 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 SLC17A9Q9BYT1 436 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 PELI2Q9HAT8 420 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 IL23AQ9NPF7 189 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 DIABLOQ9NR28 239 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CNIH4Q9P003 139 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ANKMY1Q9P2S6 941 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CLEC4EQ9ULY5 219 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 CDH10Q9Y6N8 788 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 ASCC3Q8N3C0 2202 aaKnown RBP6.83□□□□□ -1.32
VCAN-202ENST00000342785 C1orf105O95561 183 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 TSPAN12O95859 305 aa6.83□□□□□ -1.32
VCAN-202ENST00000342785 RENP00797 406 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms