RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 F2RL3Q96RI0 385 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 NPAP1Q9NZP6 1156 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TMEFF2Q9UIK5 374 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 NDRG2Q9UN36 371 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 RASD1Q9Y272 281 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PLEKHA6Q9Y2H5 1048 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 NOP16Q9Y3C1 178 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CACNG2Q9Y698 323 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TRBV4-1A0A0J9YWV2 114 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 MTMR11A4FU01 709 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 B4DXG7 233 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 POLR1CO15160 346 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ERI3O43414 337 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 IL1AP01583 271 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 MT-ND4P03905 459 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PCGF2P35227 344 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ERVK-25P63136 954 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 HOXC5Q00444 222 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PLBD1Q6P4A8 553 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 FAM198BQ6UWH4 519 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SGTBQ96EQ0 304 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SORBS1Q9BX66 1292 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PPA2Q9H2U2 334 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PIGUQ9H490 435 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SHROOM3Q8TF72 1996 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 HOXD8P13378 290 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 VIPR1P32241 457 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 GJD3Q8N144 294 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF676Q8N7Q3 588 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CXorf40AQ8TE69 158 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TRPV4Q9HBA0 871 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PCDHB16Q9NRJ7 776 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 H7BY64 318 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SYN3O14994 580 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 HYAL4Q2M3T9 481 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 SBSNQ6UWP8 590 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF627Q7L945 461 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 RANBP3LQ86VV4 465 aaPredicted RBP11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TEX26Q8N6G2 289 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 POGLUT1Q8NBL1 392 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 OR10G6Q8NH81 332 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 MOSPD2Q8NHP6 518 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PLD4Q96BZ4 506 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CD180Q99467 661 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 C17orf62Q9BQA9 187 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TMEM45AQ9NWC5 275 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 QPCTLQ9NXS2 382 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 NDUFAF4Q9P032 175 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 CDH10Q9Y6N8 788 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PSMD9O00233 223 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 JUNDP17535 347 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PGFP49763 221 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 TRAM2Q15035 370 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 FAM46CQ5VWP2 391 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ARMC6Q6NXE6 501 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 ARMC10Q8N2F6 343 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
SSX2IP-201ENST00000342203 DOCK2Q92608 1830 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF670-ZNF695F2Z2N8 137 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ZNF780AO75290 641 aaPredicted RBP11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 PITPNBP48739 271 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ARHGDIBP52566 201 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ZDHHC20Q5W0Z9 365 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 FAM122CQ6P4D5 195 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 FAM171BQ6P995 826 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 CPOQ8IVL8 374 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 CYB561A3Q8NBI2 242 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ZSWIM3Q96MP5 696 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 NTMT1Q9BV86 223 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 BHLHE41Q9C0J9 482 aaPredicted RBP11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 RDH14Q9HBH5 336 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 A3GALT2U3KPV4 340 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 C13orf42A0A1B0GVH6 325 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 GRM6O15303 877 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 HIST1H2ABP04908 130 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 UQCRC2P22695 453 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 ACVR2AP27037 513 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 GZMKP49863 264 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 SGCGQ13326 291 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 HIST3H2AQ7L7L0 130 aa11.91□□□□□ -0.5
SSX2IP-201ENST00000342203 BBS10Q8TAM1 723 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms