RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 THUMPD1Q9NXG2 353 aaKnown RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 RPS6KA6Q9UK32 745 aa16.27■□□□□ 0.2
CLDN4-201ENST00000340958 SAMD4AQ9UPU9 718 aaKnown RBP16.27■□□□□ 0.2
CLDN4-201ENST00000340958 EFCAB7A8K855 629 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 NTN3O00634 580 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 HNRNPRO43390 633 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 CTNSO60931 367 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SCRG1O75711 98 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 KDELR2P33947 212 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 NOVA1P51513 510 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 TRA2AQ13595 282 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 LASP1Q14847 261 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 TRIP10Q15642 601 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 MINDY4Q4G0A6 757 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 PPP1R3BQ86XI6 285 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ADGRG5Q8IZF4 528 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 XAGE5Q8WWM1 108 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 RAB8BQ92930 207 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SLCO4A1Q96BD0 722 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ANKRD9Q96BM1 317 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 DUS3LQ96G46 650 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 OR51I1Q9H343 314 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 DCAF13Q9NV06 445 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ARMC1Q9NVT9 282 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 TMEM184BQ9Y519 407 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 TIPRLO75663 272 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ATP1B1P05026 303 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 HMGN2P05204 90 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SLC35E2P0CK97 266 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 OR12D1P0DN82 309 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 CSRP1P21291 193 aaKnown RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SLITRK4Q8IW52 837 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SLC30A8Q8IWU4 369 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 EID3Q8N140 333 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 AGBL5Q8NDL9 886 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 OR7G2Q8NG99 324 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 DOK4Q8TEW6 326 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 SLC47A1Q96FL8 570 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 DGAT2Q96PD7 388 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ALOXE3Q9BYJ1 711 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 CXorf56Q9H5V9 222 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 TMEM38AQ9H6F2 299 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ANKRA2Q9H9E1 313 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 ENAMQ9NRM1 1142 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 AKAP7Q9P0M2 348 aaPredicted RBP16.26■□□□□ 0.19
CLDN4-201ENST00000340958 PTGFRNQ9P2B2 879 aa16.26■□□□□ 0.19
CLDN4-201ENST00000340958 PRKD3O94806 890 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 IFNA16P05015 189 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 MAOAP21397 527 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 VHLP40337 213 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 HSD17B7P56937 341 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 BTG2P78543 158 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 DSG2Q14126 1118 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 ENPP6Q6UWR7 440 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 FKBP9P1Q75LS8 142 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 B3GNT8Q7Z7M8 397 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 OR5D16Q8NGK9 328 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 LRTOMTQ8WZ04 291 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 PKP2Q99959 881 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 ASPSCR1Q9BZE9 553 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 VCX3BQ9H321 246 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 ADPRHL2Q9NX46 363 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 P2RX2Q9UBL9 471 aa16.25■□□□□ 0.19
CLDN4-201ENST00000340958 UPK1AO00322 258 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 SLC28A2O43868 658 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 JRKO75564 520 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 SLITRK5O94991 958 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 BCHEP06276 602 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 RAP2AP10114 183 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 NR2F1P10589 423 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 SPTBP11277 2137 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 FCGR1AP12314 374 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 TNNI3P19429 210 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 FASP25445 335 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 RBM44Q6ZP01 1051 aaKnown RBP16.24■□□□□ 0.19
CLDN4-201ENST00000340958 GALNT10Q86SR1 603 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 OTUB1Q96FW1 271 aaPredicted RBP16.24■□□□□ 0.19
CLDN4-201ENST00000340958 TPD52L3Q96J77 140 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 MS4A4EQ96PG1 132 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 OR1F2PQ96R84 312 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 CHID1Q9BWS9 393 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 SEMA6AQ9H2E6 1030 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 OCIAD1Q9NX40 245 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 OR2W5A6NFC9 320 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 PLOD2O00469 737 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 HMGN4O00479 90 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 CBFA2T3O75081 653 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 IFNA14P01570 189 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 ARAFP10398 606 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 CEACAM1P13688 526 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 GNA13Q14344 377 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 TRMT12Q53H54 448 aaKnown RBP16.24■□□□□ 0.19
CLDN4-201ENST00000340958 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 PWWP2BQ6NUJ5 590 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 REEP3Q6NUK4 255 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 FAM111BQ6SJ93 734 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 RNF111Q6ZNA4 994 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms