RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CLDN1O95832 211 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 CLPSP04118 112 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 NT5EP21589 574 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 SMSP52788 366 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 NAGLUP54802 743 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 NRG3P56975 720 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 IFFO1Q0D2I5 559 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 MAP4K2Q12851 820 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 HYAL4Q2M3T9 481 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 TCHHL1Q5QJ38 904 aaPredicted RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 TBCELQ5QJ74 424 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 XKRXQ6PP77 449 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 FAM47EQ6ZV65 393 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLC34A3Q8N130 599 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 VWA5B2Q8N398 1253 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF808Q8N4W9 903 aaPredicted RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF441Q8N8Z8 693 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 AENQ8WTP8 325 aaKnown RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 KLHL29Q96CT2 875 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 CCDC120Q96HB5 630 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 SECISBP2Q96T21 854 aaKnown RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 TTTY12Q9BZ98 90 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 OR10A5Q9H207 317 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 IL1RL2Q9HB29 575 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 SH2D2AQ9NP31 389 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 DEPPQ9NTK1 212 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 EHD3Q9NZN3 535 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 LGALS13Q9UHV8 139 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 WBP11Q9Y2W2 641 aaKnown RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 KLF2Q9Y5W3 355 aaPredicted RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 UNC79Q9P2D8 2635 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 E9PLN8 166 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 UBFD1O14562 309 aaKnown RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 TP53I11O14683 189 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 HS6ST1O60243 411 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 ERAL1O75616 437 aaKnown RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 BCAS2O75934 225 aaPredicted RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 SSTR4P31391 388 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 TIA1P31483 386 aaKnown RBP eCLIP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 PSPHP78330 225 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 RPP38P78345 283 aaKnown RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 ART3Q13508 389 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 C3AR1Q16581 482 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 NTRK2Q16620 822 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 IMPG1Q17R60 797 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLC22A10Q63ZE4 541 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 RNF165Q6ZSG1 346 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 TRIM46Q7Z4K8 759 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 C4orf33Q8N1A6 199 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 FBXW8Q8N3Y1 598 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF615Q8N8J6 731 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 UCN3Q969E3 161 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 C11orf24Q96F05 449 aaPredicted RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 VKORC1Q9BQB6 163 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 GIMAP4Q9NUV9 329 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 UTS2RQ9UKP6 389 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 BOKQ9UMX3 212 aaPredicted RBP12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 MEMO1Q9Y316 297 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 PLLPQ9Y342 182 aa12.3□□□□□ -0.44
SIRPB3P-201ENST00000340424 TLDC2A0PJX2 215 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ANKRD33BA6NCL7 494 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 OR14I1A6ND48 311 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ACOX3O15254 700 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF354AO60765 605 aaPredicted RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 RSL1D1O76021 490 aaKnown RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 WISP2O76076 250 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 CCL3P10147 92 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 UROSP10746 265 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 NAGAP17050 411 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 PTGER1P34995 402 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 PTGS2P35354 604 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 RFC3P40938 356 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ALDH9A1P49189 494 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 HTR6P50406 440 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 DCAF7P61962 342 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 HMGCS1Q01581 520 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF763Q0D2J5 394 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 CASP8Q14790 479 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 MRGPRGQ86SM5 289 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 TRABD2AQ86V40 505 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 CHERPQ8IWX8 916 aaKnown RBP12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 MREGQ8N565 214 aa12.29□□□□□ -0.44
SIRPB3P-201ENST00000340424 FAM13CQ8NE31 585 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms