RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MKLN1Q9UL63 735 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 LOC100506127A0A0U1RQW1 187 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 MROH6A6NGR9 719 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 SRRM3A6NNA2 597 aaPredicted RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 DIO3P55073 304 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 EEF1A1P5Q5VTE0 462 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 LINC00471Q8N535 108 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 AGAP11Q8TF27 550 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 ADAD1Q96M93 576 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 GABRG3Q99928 467 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 ZNF395Q9H8N7 513 aaPredicted RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 HK1P19367 917 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 CYB561P49447 251 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 TRAM2Q15035 370 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 OR9I1Q8NGQ6 314 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 TSC22D3Q99576 134 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 MEAF6Q9HAF1 191 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 NGBQ9NPG2 151 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 ZNF208O43345 1280 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 GPR75O95800 540 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 BCL10O95999 233 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CBFBQ13951 182 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 ALG1LQ6GMV1 187 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 OR10G2Q8NGC3 310 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CLPTM1LQ96KA5 538 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 ADOQ96SZ5 270 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 VNN2O95498 520 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 OLFM2O95897 454 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CHRNB1P11230 501 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 DCAF7P61962 342 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 ARL9Q6T311 187 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 C19orf18Q8NEA5 215 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CDCP1Q9H5V8 836 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 MAGEA13PA6NCF6 341 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 PSMD9O00233 223 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FOXE1O00358 373 aaPredicted RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 MPZL2O60487 215 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CD2P06729 351 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 IRF2P14316 349 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 SLC19A1P41440 591 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 CAPZBP47756 277 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 CHAF1BQ13112 559 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FADDQ13158 208 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 MZT2AQ6P582 158 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 SATL1Q86VE3 508 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FAM86B1Q8N7N1 296 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FRMD6Q96NE9 622 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 PTGDR2Q9Y5Y4 395 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 IL32P24001 234 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 UGT3A2Q3SY77 523 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 PLK5Q496M5 336 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 EPGNQ6UW88 154 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 OR1N1Q8NGS0 311 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 ZCCHC18P0CG32 403 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 FOLH1Q04609 750 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 EXOSC7Q15024 291 aaKnown RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 STPG1Q5TH74 334 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 METTL2BQ6P1Q9 378 aaKnown RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 CD300LGQ6UXG3 332 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 NPLQ9BXD5 320 aaPredicted RBP12.13□□□□□ -0.47
LIN54-201ENST00000340417 ANKRD10Q9NXR5 420 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 PCDHB14Q9Y5E9 798 aa12.13□□□□□ -0.47
LIN54-201ENST00000340417 PPM1BO75688 479 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 SEMA3DO95025 777 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 RAP2AP10114 183 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF43P17038 809 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 DDCP20711 480 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 TXNL4AP83876 142 aaKnown RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 RHAGQ02094 409 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 PPP1R3AQ16821 1122 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 PRAMEF20Q5VT98 475 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ABRAXAS1Q6UWZ7 409 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 LILRA3Q8N6C8 439 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF433Q8N7K0 673 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 UCN3Q969E3 161 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF160Q9HCG1 818 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ACSL6Q9UKU0 697 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 PNMA8CA0A1B0GUJ8 204 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 PRRG2O14669 202 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 BCKDKO14874 412 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CSF2P04141 144 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 TMEM44Q2T9K0 475 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 LGI4Q8N135 537 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms