RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ACRP10323 421 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 MMP8P22894 467 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 PMS2P3Q13401 168 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 GINS1Q14691 196 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 DUS2Q9NX74 493 aaKnown RBP12.31□□□□□ -0.44
USP47-202ENST00000339865 FTSJ1Q9UET6 329 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 SYNGR4O95473 234 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 KITLGP21583 273 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 FOXN2P32314 431 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 BLKP51451 505 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 PPP4CP60510 307 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 IL13RA1P78552 427 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 BANPQ8N9N5 519 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 PTGES2Q9H7Z7 377 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 SLC6A5Q9Y345 797 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 EFCAB6Q5THR3 1501 aa12.31□□□□□ -0.44
USP47-202ENST00000339865 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 CHRNA1P02708 482 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 FPR1P21462 350 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 PYCR1P32322 319 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OR9I1Q8NGQ6 314 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OR1F2PQ96R84 312 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 MRPL22Q9NWU5 206 aaKnown RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 CDC14AQ9UNH5 594 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 A0A1W2PP18 115 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MATN3O15232 486 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 LAMTOR5O43504 91 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 GJB1P08034 283 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MAP4K2Q12851 820 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 UPP1Q16831 310 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MEDAGQ5VYS4 303 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 GATSQ8NAP1 163 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ACOT11Q8WXI4 607 aaPredicted RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 SNAPC3Q92966 411 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SNX18Q96RF0 628 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 CA14Q9ULX7 337 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 GGT3PA6NGU5 568 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 ARSFP54793 590 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 CHRNA6Q15825 494 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 PAPD5Q8NDF8 572 aaKnown RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OR2AG1Q9H205 316 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 FBXO24O75426 580 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 IMPDH1P20839 514 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 CAMKVQ8NCB2 501 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OR1J4Q8NGS1 313 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 HERPUD2Q9BSE4 406 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 FKRPQ9H9S5 495 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SAGE1Q9NXZ1 904 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 PCDHB10Q9UN67 800 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OVOS2A0A0J9YW53 1432 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OVOS2Q6IE36 1432 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MYOCOSA0A1B0GUC4 107 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 HEXBP07686 556 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ARHGAP19Q14CB8 494 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 VAMP3Q15836 100 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 NLGN4YQ8NFZ3 816 aaPredicted RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 ZBTB20Q9HC78 741 aaPredicted RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 KCNIP2Q9NS61 270 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 DCAF16Q9NXF7 216 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 LGALS13Q9UHV8 139 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 OR51F1A6NGY5 319 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 TCAPO15273 167 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 C6orf47O95873 294 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 POU2F2P09086 479 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SRYQ05066 204 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 SLC2A12Q8TD20 617 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 CMTM7Q96FZ5 175 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 METTL2AQ96IZ6 378 aaKnown RBP12.3□□□□□ -0.44
USP47-202ENST00000339865 BIRC8Q96P09 236 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MGLLQ99685 303 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 MTFR1LQ9H019 292 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 LHX5Q9H2C1 402 aa12.3□□□□□ -0.44
USP47-202ENST00000339865 RTCAO00442 366 aaKnown RBP12.29□□□□□ -0.44
USP47-202ENST00000339865 STSP08842 583 aa12.29□□□□□ -0.44
USP47-202ENST00000339865 SSTR4P31391 388 aa12.29□□□□□ -0.44
USP47-202ENST00000339865 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
USP47-202ENST00000339865 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms