RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 IQCF1Q8N6M8 205 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 OR6J1Q8NGC5 347 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 CXorf58Q96LI9 332 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 NPAS1Q99742 590 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 TINF2Q9BSI4 451 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ADGRE3Q9BY15 652 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 POLDIP3Q9BY77 421 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 NLNQ9BYT8 704 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 TMEM168Q9H0V1 697 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 DPAGT1Q9H3H5 408 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 TMEM38AQ9H6F2 299 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 C11orf49Q9H6J7 331 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 FGF20Q9NP95 211 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 LATS2Q9NRM7 1088 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 MRPS18AQ9NVS2 196 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 VPS29Q9UBQ0 182 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ZNF282Q9UDV7 671 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 MGAT4BQ9UQ53 548 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SCML2Q9UQR0 700 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 PRELID3BQ9Y3B1 194 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 OR12D1P0DN82 309 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SOX18P35713 384 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 RFX3P48380 749 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 HBA1P69905 142 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ZNF169Q14929 603 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 OPCMLQ14982 345 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 XKR6Q5GH73 641 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 CDKL4Q5MAI5 379 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ANXA8L1Q5VT79 327 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 FAM151BQ6UXP7 276 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 B3GLCTQ6Y288 498 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 LRRC70Q7Z2Q7 622 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 NR2C2APQ86WQ0 139 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 MARCH9Q86YJ5 346 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SCN4BQ8IWT1 228 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 GPR135Q8IZ08 494 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 FTMTQ8N4E7 242 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 VPS37AQ8NEZ2 397 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 BEST4Q8NFU0 473 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 OR52N2Q8NGI0 321 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 NEIL3Q8TAT5 605 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 POF1BQ8WVV4 589 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 APOBEC4Q8WW27 367 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SMG7Q92540 1137 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 LPPQ93052 612 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 LRR1Q96L50 414 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SFXN2Q96NB2 322 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 FERD3LQ96RJ6 166 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SPON2Q9BUD6 331 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SARGQ9BW04 601 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 RSPO3Q9BXY4 272 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ZNF436Q9C0F3 470 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 POLR2J3Q9H1A7 115 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ZCCHC4Q9H5U6 513 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 POMT2Q9UKY4 750 aa8.91□□□□□ -0.98
NECAP1-201ENST00000339754 RUVBL1Q9Y265 456 aaKnown RBP8.91□□□□□ -0.98
NECAP1-201ENST00000339754 CCDC88CQ9P219 2028 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 C2orf92A0A1B0GVN3 265 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 TOXO94900 526 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 IFNW1P05000 195 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 LIMS3P0CW19 117 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 LIMS4P0CW20 117 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 RPL9P32969 192 aaKnown RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 MMP12P39900 470 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SLC6A12P48065 614 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SELENOPP49908 381 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 GNA13Q14344 377 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 FAM110CQ1W6H9 321 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ATRAIDQ6UW56 229 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SEZ6L2Q6UXD5 910 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 NLRC3Q7RTR2 1065 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 MIB1Q86YT6 1006 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SPATA2LQ8IUW3 424 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ZNF687Q8N1G0 1237 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 OR5M3Q8NGP4 307 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 OR2T35Q8NGX2 323 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 GOT1L1Q8NHS2 421 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ADAMTS14Q8WXS8 1223 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ATOH1Q92858 354 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 OTULINQ96BN8 352 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SCRN2Q96FV2 425 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 MYO19Q96H55 970 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ERMAPQ96PL5 475 aaPredicted RBP8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SLC38A2Q96QD8 506 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 ABHD1Q96SE0 405 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 DPYSL5Q9BPU6 564 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 MAGEH1Q9H213 219 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 PIKFYVEQ9Y2I7 2098 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 KIAA1671Q9BY89 1806 aa8.9□□□□□ -0.98
NECAP1-201ENST00000339754 A0A1B0GVC2 190 aa8.9□□□□□ -0.99
NECAP1-201ENST00000339754 A6NIN4 97 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms