RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF630Q2M218 657 aaPredicted RBP13.76□□□□□ -0.21
CBX3-201ENST00000337620 ZNF628Q5EBL2 1059 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 RHBDD2Q6NTF9 364 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 AGBL5Q8NDL9 886 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 LRTOMTQ8WZ04 291 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
CBX3-201ENST00000337620 CTRCQ99895 268 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
CBX3-201ENST00000337620 UGT2B28Q9BY64 529 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 PARD6AQ9NPB6 346 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 C6orf203Q9P0P8 240 aaPredicted RBP13.76□□□□□ -0.21
CBX3-201ENST00000337620 PTGFRNQ9P2B2 879 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 SEC16AO15027 2179 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 C5orf58C9J3I9 102 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 GDF9O60383 454 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 MT-ND1P03886 318 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 KHKP50053 298 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 CHRNB3Q05901 458 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 PRICKLE4Q2TBC4 344 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 MINDY4Q4G0A6 757 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 FAM98BQ52LJ0 330 aaKnown RBP13.76□□□□□ -0.21
CBX3-201ENST00000337620 DGAT2L6Q6ZPD8 337 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 SLC38A9Q8NBW4 561 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 HNRNPRO43390 633 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 BMP10O95393 424 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 BCHEP06276 602 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 CT62P0C5K7 136 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 SOX18P35713 384 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 ANXA11P50995 505 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 PDX1P52945 283 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 EEF1A2Q05639 463 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 TRIP10Q15642 601 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 LRRC36Q1X8D7 754 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 VWA2Q5GFL6 755 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 INTS11Q5TA45 600 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 RBM44Q6ZP01 1051 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 ST13P4Q8IZP2 240 aaPredicted RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 OR2L13Q8N349 312 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 SLC38A5Q8WUX1 472 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 SLC47A1Q96FL8 570 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 PTCHD1Q96NR3 888 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 DGAT2Q96PD7 388 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 OR1F2PQ96R84 312 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 ADAP2Q9NPF8 381 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 NECTIN3Q9NQS3 549 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 LANCL2Q9NS86 450 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 MAT2BQ9NZL9 334 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 ANGPT4Q9Y264 503 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 HCN4Q9Y3Q4 1203 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 TMEM247A6NEH6 219 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 POLR1CO15160 346 aaPredicted RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 GCM2O75603 506 aaPredicted RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 IFNA16P05015 189 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 AMIGO2Q86SJ2 522 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 EID3Q8N140 333 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 RIT1Q92963 219 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 GIMAP5Q96F15 307 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 TMEM19Q96HH6 336 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 PYURFQ96I23 114 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 MS4A4EQ96PG1 132 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 ACTRT3Q9BYD9 372 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 ASPSCR1Q9BZE9 553 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 OLAHQ9NV23 265 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 THUMPD1Q9NXG2 353 aaKnown RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 NTMQ9P121 344 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 P2RX2Q9UBL9 471 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 RIMS3Q9UJD0 308 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 RPS6KA6Q9UK32 745 aa13.75□□□□□ -0.21
CBX3-201ENST00000337620 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
CBX3-201ENST00000337620 SLC28A2O43868 658 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 PLOD3O60568 738 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 RAP2AP10114 183 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 CCL4P13236 92 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 VHLP40337 213 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 IGLV3-21P80748 117 aaPredicted RBP13.74□□□□□ -0.21
CBX3-201ENST00000337620 MGAT2Q10469 447 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 IL11RAQ14626 422 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 EXOSC7Q15024 291 aaKnown RBP13.74□□□□□ -0.21
CBX3-201ENST00000337620 SYPL1Q16563 259 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 NKG7Q16617 165 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 RPS26P11Q5JNZ5 115 aaPredicted RBP13.74□□□□□ -0.21
CBX3-201ENST00000337620 IRAK1BP1Q5VVH5 260 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 SLC30A8Q8IWU4 369 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 GALNT12Q8IXK2 581 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 PAPD5Q8NDF8 572 aaKnown RBP13.74□□□□□ -0.21
CBX3-201ENST00000337620 ZNF675Q8TD23 568 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 TPD52L3Q96J77 140 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms