RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SEC22CQ9BRL7 303 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TMEM175Q9BSA9 504 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 OR51J1Q9H342 316 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TNFRSF12AQ9NP84 129 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 NIT2Q9NQR4 276 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ARHGAP33O14559 1287 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 POU3F3P20264 500 aaPredicted RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 HNF1BP35680 557 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 STK19P49842 368 aaPredicted RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 HTR6P50406 440 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 PSMA6P60900 246 aaKnown RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF763Q0D2J5 394 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ATG9BQ674R7 924 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 LRRTM4Q86VH4 590 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 B3GNT7Q8NFL0 401 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TEX37Q96LM6 180 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 PLAC1Q9HBJ0 212 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 POLE3Q9NRF9 147 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 COPS3Q9UNS2 423 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 FXYD1O00168 92 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 SLC16A6O15403 523 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 B3GALT2O43825 422 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ITGAMP11215 1152 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 FDXRP22570 491 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 IRAK1BP1Q5VVH5 260 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TTLQ8NG68 377 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 OR6M1Q8NGM8 313 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF419Q96HQ0 510 aaPredicted RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 BCL2L14Q9BZR8 327 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ADAMTS5Q9UNA0 930 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 AKAP11Q9UKA4 1901 aa15.33■□□□□ 0.05
NPHP3-201ENST00000337331 ARID1BQ8NFD5 2236 aaPredicted RBP15.33■□□□□ 0.05
NPHP3-201ENST00000337331 TIAM2Q8IVF5 1701 aa15.33■□□□□ 0.05
NPHP3-201ENST00000337331 LGALS8O00214 317 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 AKAP8O43823 692 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 KCNJ13O60928 360 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 PFKMP08237 780 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 ENPP1P22413 925 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 PRDX3P30048 256 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 RPS19P39019 145 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 TGM4P49221 684 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 DAPP51397 102 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 KIAA1024LP59773 190 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 HOXC5Q00444 222 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 SLC25A25Q6KCM7 469 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 OR7G3Q8NG95 312 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 RPLP0P6Q8NHW5 317 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 USB1Q9BQ65 265 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 SDHAF2Q9NX18 166 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 PKD1L3Q7Z443 1732 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 PEX14O75381 377 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 HTR1AP08908 422 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 DDX6P26196 483 aaKnown RBP eCLIP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 HSD17B2P37059 387 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 GRK6P43250 576 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 GBX2P52951 348 aaPredicted RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 EXOSC2Q13868 293 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 PTRH1Q86Y79 214 aaKnown RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 SAMD12Q8N8I0 201 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 RNF31Q96EP0 1072 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 LIN7BQ9HAP6 207 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 SOCS5O75159 536 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 TMEM115Q12893 351 aaPredicted RBP15.33■□□□□ 0.04
NPHP3-201ENST00000337331 LRRTM3Q86VH5 581 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 ENTHD1Q8IYW4 607 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 KLHL36Q8N4N3 616 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 TNFRSF10DQ9UBN6 386 aa15.33■□□□□ 0.04
NPHP3-201ENST00000337331 TCRBV5S1A1TA0A578 114 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PROM1O43490 865 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PCDHGA12O60330 932 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 MRPS14O60783 128 aaKnown RBP15.32■□□□□ 0.04
NPHP3-201ENST00000337331 RAF1P04049 648 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 ARFIP1P53367 373 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 FGL1Q08830 312 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 CHST4Q8NCG5 386 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 ELAC1Q9H777 363 aaKnown RBP15.32■□□□□ 0.04
NPHP3-201ENST00000337331 NEUROD4Q9HD90 331 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 DCAF13Q9NV06 445 aaKnown RBP15.32■□□□□ 0.04
NPHP3-201ENST00000337331 FAM170BA6NMN3 283 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 UBFD1O14562 309 aaKnown RBP15.32■□□□□ 0.04
NPHP3-201ENST00000337331 SHOXO15266 292 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PDYNP01213 254 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 C1QAP02745 245 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 GSTM3P21266 225 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 MAP2K6P52564 334 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 REEP3Q6NUK4 255 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 CEP68Q76N32 757 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 SLC5A8Q8N695 610 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 PFDN5Q99471 154 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 RAB11FIP5Q9BXF6 653 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 OR6C2Q9NZP2 312 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 MGAT4CQ9UBM8 478 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 A0A075B6Q4 140 aa15.32■□□□□ 0.04
NPHP3-201ENST00000337331 OR6C74A6NCV1 312 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms