RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 KLHDC9Q8NEP7 349 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 OR52N2Q8NGI0 321 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 MYO19Q96H55 970 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 COPZ2Q9P299 210 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 LIPT1Q9Y234 373 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 PRSS21Q9Y6M0 314 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 PIKFYVEQ9Y2I7 2098 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 ZNF98A6NK75 572 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 OR10H3O60404 316 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 MMP20O60882 483 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 EPHA4P54764 986 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 ZNF630Q2M218 657 aaPredicted RBP23.07■■□□□ 1.28
SOX1-201ENST00000330949 KRT74Q7RTS7 529 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 RNF175Q8N4F7 328 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 HERVK_113Q902F9 699 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 FOPNLQ96NB1 174 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 SEMA3GQ9NS98 782 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 COPS3Q9UNS2 423 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 CHD5Q8TDI0 1954 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 ARPC4-TTLL3A0A0A6YYG9 625 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CHI3L1P36222 383 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 FLI1Q01543 452 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 ZNF169Q14929 603 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 MPPE1Q53F39 396 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 LRRC28Q86X40 367 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 MARCH9Q86YJ5 346 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 OR2T35Q8NGX2 323 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 OR4K3Q96R72 315 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 SPON2Q9BUD6 331 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 GPR63Q9BZJ6 419 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 MS4A7Q9GZW8 240 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 RC3H2Q9HBD1 1191 aaKnown RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 IMP3Q9NV31 184 aaKnown RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 NOD1Q9Y239 953 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 TRPM7Q96QT4 1865 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CCDC88CQ9P219 2028 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 A8MXK9 166 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 RNASET2O00584 256 aaKnown RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 PTP4A3O75365 173 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CAMK1Q14012 370 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 OXR1Q8N573 874 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CIDECQ96AQ7 238 aaPredicted RBP23.06■■□□□ 1.28
SOX1-201ENST00000330949 SCRN2Q96FV2 425 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 LRR1Q96L50 414 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 PKP4Q99569 1192 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CDCP1Q9H5V8 836 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 CYSLTR2Q9NS75 346 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 POMT2Q9UKY4 750 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 SCN8AQ9UQD0 1980 aa23.06■■□□□ 1.28
SOX1-201ENST00000330949 LDOC1O95751 146 aaPredicted RBP23.05■■□□□ 1.28
SOX1-201ENST00000330949 HRGP04196 525 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 RAB40BQ12829 278 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 TAF1CQ15572 869 aaPredicted RBP23.05■■□□□ 1.28
SOX1-201ENST00000330949 DCST1Q5T197 706 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 MFSD14CQ5VZR4 134 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 TRIM40Q6P9F5 258 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 FAM151BQ6UXP7 276 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 KANSL1Q7Z3B3 1105 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 LINC00469Q8N7U9 141 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 OR5M3Q8NGP4 307 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 POF1BQ8WVV4 589 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 ADAMTS14Q8WXS8 1223 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 USB1Q9BQ65 265 aaKnown RBP23.05■■□□□ 1.28
SOX1-201ENST00000330949 ARHGAP9Q9BRR9 750 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 C2orf78A6NCI8 922 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 XKR6Q5GH73 641 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 ZNF582Q96NG8 517 aaPredicted RBP23.05■■□□□ 1.28
SOX1-201ENST00000330949 SLC38A2Q96QD8 506 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 RNF32Q9H0A6 362 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 FGF20Q9NP95 211 aaPredicted RBP23.05■■□□□ 1.28
SOX1-201ENST00000330949 ANGPT4Q9Y264 503 aa23.05■■□□□ 1.28
SOX1-201ENST00000330949 PRRG1O14668 218 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 JUPP14923 745 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 OR1G1P47890 313 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 OPCMLQ14982 345 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 ZNF852Q6ZMS4 543 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 C3P1Q6ZMU1 363 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 PM20D2Q8IYS1 436 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 ARIH2OSQ8N7S6 290 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 DBF4BQ8NFT6 615 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 SLC35A5Q9BS91 424 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 H2AFJQ9BTM1 129 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 PFDN2Q9UHV9 154 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 EXOSC1Q9Y3B2 195 aaKnown RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 FFAR1O14842 300 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 SSNA1O43805 119 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 RBMS1P29558 406 aaKnown RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 RAG2P55895 527 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 ERVK-21P61565 698 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 S100A12P80511 92 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 EEF1A2Q05639 463 aaKnown RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 MBTPS1Q14703 1052 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 C10orf120Q5SQS8 335 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 RGS7BPQ6MZT1 257 aaPredicted RBP23.04■■□□□ 1.28
SOX1-201ENST00000330949 TRPV1Q8NER1 839 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 ADAMTS19Q8TE59 1207 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 OR51B5Q9H339 312 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 C1GALT1Q9NS00 363 aa23.04■■□□□ 1.28
SOX1-201ENST00000330949 AFF4Q9UHB7 1163 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms