RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TMEM159Q96B96 161 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 RNFT2Q96EX2 444 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 TRAF4Q9BUZ4 470 aaPredicted RBP13.68□□□□□ -0.22
SNX20-202ENST00000330943 TMED9Q9BVK6 235 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 MYNNQ9NPC7 610 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 BTN3A3O00478 584 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 NAT1P18440 290 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
SNX20-202ENST00000330943 AGFG1P52594 562 aaKnown RBP13.68□□□□□ -0.22
SNX20-202ENST00000330943 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNX20-202ENST00000330943 ZNF284Q2VY69 593 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 KLHL22Q53GT1 634 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 FAM205BPQ63HN1 556 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 RASGRP3Q8IV61 690 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 OR56A3Q8NH54 315 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 SENP5Q96HI0 755 aaPredicted RBP13.68□□□□□ -0.22
SNX20-202ENST00000330943 SORBS1Q9BX66 1292 aaKnown RBP13.68□□□□□ -0.22
SNX20-202ENST00000330943 LINC00597Q9H2U6 94 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 TBC1D17Q9HA65 648 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 DMRT3Q9NQL9 472 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 GPR52Q9Y2T5 361 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 CDH10Q9Y6N8 788 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 SPEGQ15772 3267 aa13.68□□□□□ -0.22
SNX20-202ENST00000330943 TSPAN6O43657 245 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 UQCRC2P22695 453 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 CD70P32970 193 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 INSL4Q14641 139 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 GLRX5Q86SX6 157 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 MEX3DQ86XN8 651 aaKnown RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 LRRC20Q8TCA0 184 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 DNAJA4Q8WW22 397 aaPredicted RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 SLC9A6Q92581 669 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 KCNJ15Q99712 375 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 PPIL3Q9H2H8 161 aaKnown RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 GLTPQ9NZD2 209 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 TAAR2Q9P1P5 351 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 DOCK6Q96HP0 2047 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 KLHL18O94889 574 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 OR12D1P0DN82 309 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 MMP11P24347 488 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 PBLDP30039 288 aaPredicted RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 GIPRP48546 466 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 SNRPD1P62314 119 aaKnown RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 METAP1DQ6UB28 335 aaPredicted RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 MARCH9Q86YJ5 346 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 OR8H3Q8N146 312 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 SCLYQ96I15 445 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 FBXW2Q9UKT8 454 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 RFPL3O75679 317 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 SOD1P00441 154 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 EPHX1P07099 455 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 ACP2P11117 423 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 FGF9P31371 208 aaPredicted RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 GAS1P54826 345 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 TBPL1P62380 186 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 ALDH6A1Q02252 535 aaKnown RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
SNX20-202ENST00000330943 LHFPL3Q86UP9 236 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 SEC14L3Q9UDX4 400 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 CLCA2Q9UQC9 943 aa13.67□□□□□ -0.22
SNX20-202ENST00000330943 SHISA3A0PJX4 238 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 PIPSLA2A3N6 862 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ANHXE9PGG2 379 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 M0R3H8 397 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 LALBAP00709 142 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ACLYP53396 1101 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 FCN2Q15485 313 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ASB18Q6ZVZ8 466 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ZER1Q7Z7L7 766 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 IQCHQ86VS3 1027 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ARL14EPQ8N8R7 260 aaPredicted RBP13.66□□□□□ -0.22
SNX20-202ENST00000330943 PLA2G15Q8NCC3 412 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 NEIL3Q8TAT5 605 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ADAMTS19Q8TE59 1207 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 CREB3L1Q96BA8 519 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 AP2M1Q96CW1 435 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ZNF354BQ96LW1 612 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 SGK494L7N484 410 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 GTPBP1O00178 669 aaKnown RBP13.66□□□□□ -0.22
SNX20-202ENST00000330943 SLC22A5O76082 557 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 PDHA2P29803 388 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 PER3P56645 1201 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 RAB40BQ12829 278 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
SNX20-202ENST00000330943 BCL2L15Q5TBC7 163 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 B3GLCTQ6Y288 498 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 DTX3Q8N9I9 347 aa13.66□□□□□ -0.22
SNX20-202ENST00000330943 OR4K5Q8NGD3 323 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms