RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZFP62Q8NB50 900 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 TMEM52Q8NDY8 209 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 C17orf47Q8NEP4 570 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 C16orf52Q8NHV5 167 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 PHF10Q8WUB8 498 aaKnown RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 PTPMT1Q8WUK0 201 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 IFT81Q8WYA0 676 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 EXT2Q93063 718 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 NCLNQ969V3 563 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 ESAMQ96AP7 390 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 ANKRD9Q96BM1 317 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 SGCZQ96LD1 299 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 SIGLEC12Q96PQ1 595 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 FRG2BQ96QU4 278 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 MAPKAP1Q9BPZ7 522 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 ZNF717Q9BY31 904 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 ALOXE3Q9BYJ1 711 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 VPS11Q9H270 941 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 RPF2Q9H7B2 306 aaKnown RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 WDR41Q9HAD4 459 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 NMRK1Q9NWW6 199 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 AHSPQ9NZD4 102 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 LRFN1Q9P244 771 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 XPR1Q9UBH6 696 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 COPS7AQ9UBW8 275 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 SEC14L3Q9UDX4 400 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 TRPS1Q9UHF7 1281 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 ZNF223Q9UK11 482 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 ACAD8Q9UKU7 415 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 KLF2Q9Y5W3 355 aaPredicted RBP5.88□□□□□ -1.47
SMG1-201ENST00000330588 CLCA3PQ9Y6N3 262 aa5.88□□□□□ -1.47
SMG1-201ENST00000330588 PIEZO2Q9H5I5 2752 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 KALRNO60229 2985 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 UBR5O95071 2799 aaPredicted RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 TRBV11-1A0A0K0K1C0 115 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 OR7A17O14581 309 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 PROM1O43490 865 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 SUSD5O60279 629 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 CBX7O95931 251 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 IGKV3-11P04433 115 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 NR2F6P10588 404 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 KIR3DL1P43629 444 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 CCNG1P51959 295 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 HNRNPFP52597 415 aaKnown RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 HERVK_113P63132 956 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ALDH6A1Q02252 535 aaKnown RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 STX4Q12846 297 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ART3Q13508 389 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 FBXO48Q5FWF7 155 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 OR52E8Q6IFG1 317 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 C16orf87Q6PH81 154 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 OPN5Q6U736 354 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 HSDL2Q6YN16 418 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ST13P4Q8IZP2 240 aaPredicted RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 CYP4Z2PQ8N1L4 340 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 METTL4Q8N3J2 472 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 KIF2BQ8N4N8 673 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ZNF808Q8N4W9 903 aaPredicted RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 PTGR2Q8N8N7 351 aaPredicted RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 SLC2A12Q8TD20 617 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ZNF721Q8TF20 911 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 CCDC126Q96EE4 140 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 L3HYPDHQ96EM0 354 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 FBXL20Q96IG2 436 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 CSF3RQ99062 836 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ERVK-6Q9BXR3 956 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 L2HGDHQ9H9P8 463 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 PNO1Q9NRX1 252 aaKnown RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 PSMC3IPQ9P2W1 217 aaPredicted RBP5.87□□□□□ -1.47
SMG1-201ENST00000330588 MYOTQ9UBF9 498 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 NFU1Q9UMS0 254 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 SNX6Q9UNH7 406 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ASB4Q9Y574 426 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 ESPL1Q14674 2120 aa5.87□□□□□ -1.47
SMG1-201ENST00000330588 A0A0G2JN53 185 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 SHISA3A0PJX4 238 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 CCDC151A5D8V7 595 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 A8MT66 165 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 C17orf105B2RV13 164 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 ASNA1O43681 348 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 ITGA10O75578 1167 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 GPR75O95800 540 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 IFNA16P05015 189 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 ENO1P06733 434 aaKnown RBP5.86□□□□□ -1.47
SMG1-201ENST00000330588 SBK3P0C264 359 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 FAM58BPP0C7Q3 252 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 SLC35E2P0CK97 266 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 ALOX15P16050 662 aaPredicted RBP5.86□□□□□ -1.47
SMG1-201ENST00000330588 ZNF24P17028 368 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 ATP5F1P24539 256 aaPredicted RBP5.86□□□□□ -1.47
SMG1-201ENST00000330588 MST1P26927 711 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 GCAP28676 217 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 CLK1P49759 484 aaKnown RBP5.86□□□□□ -1.47
SMG1-201ENST00000330588 HK2P52789 917 aa5.86□□□□□ -1.47
SMG1-201ENST00000330588 PKNOX1P55347 436 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms