RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 PMPCAQ10713 525 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 CCNYL2Q5T2Q4 361 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 WLSQ5T9L3 541 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 C6orf163Q5TEZ5 329 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 RTL6Q6ICC9 239 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 B3GNT6Q6ZMB0 384 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 TRMT10CQ7L0Y3 403 aaKnown RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 COMMD6Q7Z4G1 85 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 UCN3Q969E3 161 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 OR10A5Q9H207 317 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 LDAHQ9H6V9 325 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 KCNJ16Q9NPI9 418 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 B4GALT7Q9UBV7 327 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 CFL2Q9Y281 166 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 NPFFR2Q9Y5X5 522 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 F8P00451 2351 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 ANKHD1Q8IWZ3 2542 aaKnown RBP12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 A0A1B0GTL3 188 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ATP6AP2A0A1C7CYW4 349 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 A0A1W2PS29 197 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ATP6AP2O75787 350 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 SNX4O95219 450 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 PDYNP01213 254 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 NAGAP17050 411 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 TAC1P20366 129 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 S1PR1P21453 382 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 HSD17B3P37058 310 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 NRG3P56975 720 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 CLCQ05315 142 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 PRICKLE4Q2TBC4 344 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF678Q5SXM1 525 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 PRAMEF20Q5VT98 475 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 HLA-DQA1Q5Y7H0 255 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 MEX3BQ6ZN04 569 aaKnown RBP12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 NEIL3Q8TAT5 605 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 SPPL2AQ8TCT8 520 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF592Q92610 1267 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 CTHRC1Q96CG8 243 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF597Q96LX8 424 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF382Q96SR6 550 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 DOHHQ9BU89 302 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ANGPTL4Q9BY76 406 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 MCCC2Q9HCC0 563 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF639Q9UID6 485 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 SLC12A4Q9UP95 1085 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 STK38LQ9Y2H1 464 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 DOCK7Q96N67 2140 aa12.47□□□□□ -0.41
GTF3C6-201ENST00000329970 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 PPP6CO00743 305 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 GSTA1P08263 222 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 RFPL3SP0C7P2 107 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 GLI4P10075 376 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 GPX3P22352 226 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 ZFP36L2P47974 494 aaKnown RBP12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 CDH13P55290 713 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 MGAT2Q10469 447 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 CSTF3Q12996 717 aaKnown RBP12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 RASA2Q15283 850 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 C1orf185Q5T7R7 199 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 RIPPLY2Q5TAB7 128 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 TMEM198Q66K66 360 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF585AQ6P3V2 769 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 DMRTC2Q8IXT2 367 aaPredicted RBP12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 IFT20Q8IY31 132 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 VWA5B2Q8N398 1253 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 CEP112Q8N8E3 955 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 OR5M9Q8NGP3 310 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 ACMSDQ8TDX5 336 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 DOK4Q8TEW6 326 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 DIO2Q92813 273 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 FAIM2Q9BWQ8 316 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 UBQLN3Q9H347 655 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 FARSBQ9NSD9 589 aaKnown RBP12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 MAT2BQ9NZL9 334 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 VPS29Q9UBQ0 182 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 MCM8Q9UJA3 840 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 ACAD8Q9UKU7 415 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 PSME2Q9UL46 239 aa12.46□□□□□ -0.41
GTF3C6-201ENST00000329970 SERTM1A2A2V5 107 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 ACOX3O15254 700 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 RIPK2O43353 540 aa12.45□□□□□ -0.42
GTF3C6-201ENST00000329970 OR4F21O95013 312 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms