RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 LGI4Q8N135 537 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 DNAJC22Q8N4W6 341 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 OR5T3Q8NGG3 340 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 COL26A1Q96A83 441 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 TCTN2Q96GX1 697 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 NPLQ9BXD5 320 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 RSPO3Q9BXY4 272 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 ANKRA2Q9H9E1 313 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 EQTNQ9NQ60 294 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 KRT84Q9NSB2 600 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 UCKL1Q9NWZ5 548 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 SEC14L3Q9UDX4 400 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 PCDHGA8Q9Y5G5 932 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 TRIM64CA6NLI5 447 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 BCKDKO14874 412 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ASNA1O43681 348 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 BMP10O95393 424 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 CTSBP07858 339 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 PORP16435 677 aaPredicted RBP14.03□□□□□ -0.16
TPM3-205ENST00000328159 ELK4P28324 431 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 MAN2A2P49641 1150 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 AFF3P51826 1226 aaKnown RBP14.03□□□□□ -0.16
TPM3-205ENST00000328159 SHC2P98077 582 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 EXOC3L2Q2M3D2 409 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ZNF691Q5VV52 312 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ZNF605Q86T29 641 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ARHGEF39Q8N4T4 335 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 OR7G2Q8NG99 324 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 GIMAP5Q96F15 307 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 IER2Q9BTL4 223 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ACTRT3Q9BYD9 372 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ANKHQ9HCJ1 492 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 DDX18Q9NVP1 670 aaKnown RBP14.03□□□□□ -0.16
TPM3-205ENST00000328159 NTMQ9P121 344 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 KCNE3Q9Y6H6 103 aa14.03□□□□□ -0.16
TPM3-205ENST00000328159 A0A0G2JPF8 293 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 HNRNPCL2B2RXH8 293 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 HNRNPCL3B7ZW38 293 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 SGK494L7N484 410 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 CYR61O00622 381 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 OR6B1O95007 311 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 CHRM4P08173 479 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 HNRNPCL4P0DMR1 293 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 PPM1FP49593 454 aaPredicted RBP14.02□□□□□ -0.16
TPM3-205ENST00000328159 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.16
TPM3-205ENST00000328159 RAB38P57729 211 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 ID2Q02363 134 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 PRTGQ2VWP7 1150 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 GPAT3Q53EU6 434 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 C6orf132Q5T0Z8 1188 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 PRAMEF8Q5VWM4 474 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 PRAMEF7Q5VXH5 474 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 FAM111BQ6SJ93 734 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 SHISA5Q8N114 240 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 TTC29Q8NA56 475 aaPredicted RBP14.02□□□□□ -0.16
TPM3-205ENST00000328159 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 OR10G2Q8NGC3 310 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 OR9A4Q8NGU2 314 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 OR52J3Q8NH60 311 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 ZNF354BQ96LW1 612 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 MS4A4EQ96PG1 132 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 SPATA5L1Q9BVQ7 753 aa14.02□□□□□ -0.16
TPM3-205ENST00000328159 KIF1CO43896 1103 aaKnown RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 FGF17O60258 216 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 SRPX2O60687 465 aaPredicted RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 RDH16O75452 317 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 GPR75O95800 540 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 CYP4B1P13584 511 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ETS2P15036 469 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 RYKP34925 604 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 LIMS1P48059 325 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ALDH3B2P48448 385 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 RPS6KA3P51812 740 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 HMGA2P52926 109 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 ISL1P61371 349 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 CD47Q08722 323 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 KEAP1Q14145 624 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 GANABQ14697 944 aaKnown RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 MEP1AQ16819 746 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 MICAQ29983 383 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 CTU2Q2VPK5 515 aaKnown RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 RBM48Q5RL73 367 aaKnown RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 OR2L13Q8N349 312 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 SLC5A8Q8N695 610 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 CHDHQ8NE62 594 aaPredicted RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 HDAC2Q92769 488 aaKnown RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 TANKQ92844 425 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 MYCBPQ99417 103 aaPredicted RBP14.01□□□□□ -0.17
TPM3-205ENST00000328159 BTBD2Q9BX70 525 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 YIPF3Q9GZM5 350 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 PTGFRNQ9P2B2 879 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 MUTYHQ9UIF7 546 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 A0A1B0GVT2 93 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 RHPN2P1A8MT19 583 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 FAM227AF5H4B4 570 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 LDB3O75112 727 aa14.01□□□□□ -0.17
TPM3-205ENST00000328159 GADD45GO95257 159 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms