RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ALDH9A1P49189 494 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 EEFSECP57772 596 aaKnown RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ITGADQ13349 1161 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 PMS2P3Q13401 168 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■□□□□ 10.9
DDX39A-202ENST00000324340 GPR19Q15760 415 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 FAM214AQ32MH5 1076 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 YOD1Q5VVQ6 348 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 GPR107Q5VW38 600 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 NAXDQ8IW45 347 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 PEX5LQ8IYB4 626 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 CA13Q8N1Q1 262 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TTC29Q8NA56 475 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 PIK3C3Q8NEB9 887 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 OR1L3Q8NH93 324 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ATOH1Q92858 354 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 UCN3Q969E3 161 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TXNDC15Q96J42 360 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 CCDC74BQ96LY2 380 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 SH3GL1Q99961 368 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 CPPED1Q9BRF8 314 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ADI1Q9BV57 179 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 SPRTNQ9H040 489 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 POLR1BQ9H9Y6 1135 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 SLC35C2Q9NQQ7 365 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 CCM2LQ9NUG4 571 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-202ENST00000324340 AP3M1Q9Y2T2 418 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 A0A1W2PRB8 838 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 MYO1GB0I1T2 1018 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 H0YIG0 161 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 CYR61O00622 381 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PGRMC2O15173 223 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PDPK1O15530 556 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 DEAF1O75398 565 aaPredicted RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 PRKRAO75569 313 aaKnown RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 CAPGP40121 348 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 ITGA1P56199 1179 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 RAB38P57729 211 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 HBA1P69905 142 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PLIN5Q00G26 463 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 ACY1Q03154 408 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 BNIP2Q12982 314 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 FXNQ16595 210 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 NRF1Q16656 503 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 GTDC1Q4AE62 458 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 RABL3Q5HYI8 236 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 FGD3Q5JSP0 725 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 GPR155Q7Z3F1 870 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 IQCF2Q8IXL9 164 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PARP8Q8N3A8 854 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 OR9A4Q8NGU2 314 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PSMA8Q8TAA3 256 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 OR5P2Q8WZ92 322 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 MVB12AQ96EY5 273 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 ZBED6CLQ96FA7 236 aaPredicted RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 FANCEQ9HB96 536 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 PARD6AQ9NPB6 346 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 SLAMF7Q9NQ25 335 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 FGF21Q9NSA1 209 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 SIDT1Q9NXL6 827 aaKnown RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 TAS2R9Q9NYW1 312 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF282Q9UDV7 671 aaPredicted RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 SERTAD3Q9UJW9 196 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 SATB2Q9UPW6 733 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 HEMK1Q9Y5R4 338 aaPredicted RBP12□□□□□ -0.49
DDX39A-202ENST00000324340 SPACA6W5XKT8 324 aa12□□□□□ -0.49
DDX39A-202ENST00000324340 GOLGA4Q13439 2230 aaKnown RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 A0A0A6YYC8 382 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 FAM172BPA6NC97 362 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF860A6NHJ4 632 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 I3L1I5 382 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SGK494L7N484 410 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 FOXD2O60548 495 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 RDH16O75452 317 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 RASAL1O95294 804 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 C6orf47O95873 294 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 GSNP06396 782 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 GPX2P18283 190 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 IL10P22301 178 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 TLX1P31314 330 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ARSFP54793 590 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 OLR1P78380 273 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ILKQ13418 452 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 SELPLGQ14242 412 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 ATP6AP1Q15904 470 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 AASDHQ4L235 1098 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 RBM48Q5RL73 367 aaKnown RBP11.99□□□□□ -0.49
DDX39A-202ENST00000324340 BROXQ5VW32 411 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 USP51Q70EK9 711 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 MED25Q71SY5 747 aa11.99□□□□□ -0.49
DDX39A-202ENST00000324340 GPR135Q8IZ08 494 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms