RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PCDHGA6Q9Y5G7 932 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 CD8B2A6NJW9 211 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 CD8BP10966 210 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 NDUFS1P28331 727 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 TGFBR2P37173 567 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF91Q05481 1191 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ELAVL3Q14576 367 aaKnown RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 SHFQ7M4L6 423 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 FAM83FQ8NEG4 500 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ANKK1Q8NFD2 765 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 DYNC2LI1Q8TCX1 351 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 PFDN2Q9UHV9 154 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 NUP214P35658 2090 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ITPKBP27987 946 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ACTR1BP42025 376 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 CASP3P42574 277 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 STARP49675 285 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 TAS2R38P59533 333 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ACTR1AP61163 376 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 RHAGQ02094 409 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ILF3Q12906 894 aaKnown RBP eCLIP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 NKG7Q16617 165 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF563Q8TA94 476 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF354BQ96LW1 612 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 NIPSNAP1Q9BPW8 284 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 SORBS1Q9BX66 1292 aaKnown RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 SOHLH2Q9NX45 425 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 MCM3APO60318 1980 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 PRKYO43930 277 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 B3GALT4O96024 378 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 GASTP01350 101 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 ASGR2P07307 311 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 MRPL19P49406 292 aaKnown RBP14□□□□□ -0.17
TCOF1-201ENST00000323668 RSPO2Q6UXX9 243 aaPredicted RBP14□□□□□ -0.17
TCOF1-201ENST00000323668 GSDMCQ9BYG8 508 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 LINC00597Q9H2U6 94 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 N6AMT1Q9Y5N5 214 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 LY75O60449 1722 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 C2orf92A0A1B0GVN3 265 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 C1orf226A1L170 272 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 NDUFV2P19404 249 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 IMPA1P29218 277 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 GRK6P43250 576 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 NDUFAF5Q5TEU4 345 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 OR4C11Q6IEV9 310 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 POMGNT2Q8NAT1 580 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 OR4E2Q8NGC2 313 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 OR5M11Q96RB7 305 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 TAS2R16Q9NYV7 291 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 TMEM5Q9Y2B1 443 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 PRODHO43272 600 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 PON3Q15166 354 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 XAF1Q6GPH4 301 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 LIPIQ6XZB0 460 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 TMEM173Q86WV6 379 aaPredicted RBP14□□□□□ -0.17
TCOF1-201ENST00000323668 COMMD2Q86X83 199 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 NLGN4XQ8N0W4 816 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 RASGEF1AQ8N9B8 481 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 OR52P1PQ8NH57 321 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 HS3ST2Q9Y278 367 aa14□□□□□ -0.17
TCOF1-201ENST00000323668 A0A0G2JPF8 293 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF879B4DU55 563 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 HNRNPCL3B7ZW38 293 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 I3L521 148 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CLDN4O14493 209 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 C1orf105O95561 183 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 HNRNPCL4P0DMR1 293 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 GIPRP48546 466 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 PFN3P60673 137 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 TMEM35AQ53FP2 167 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 PYCR3Q53H96 274 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 C8orf82Q6P1X6 216 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 TMEM107Q6UX40 140 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 WFDC5Q8TCV5 224 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ACOT12Q8WYK0 555 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 DPH7Q9BTV6 452 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 MLLT11Q13015 90 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF791Q3KP31 576 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 RASSF6Q6ZTQ3 369 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 OR5AR1Q8NGP9 310 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 SYNDIG1Q9H7V2 258 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF639Q9UID6 485 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 INSL6Q9Y581 213 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 FKBP7Q9Y680 259 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 CDH10Q9Y6N8 788 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 TAF1LQ8IZX4 1826 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 HMX3A6NHT5 357 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ANXA2P2A6NMY6 339 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 FOXE1O00358 373 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 EEF1E1O43324 174 aaKnown RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 SCN2BO60939 215 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 PAK4O96013 591 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 ANXA2P07355 339 aaKnown RBP13.99□□□□□ -0.17
TCOF1-201ENST00000323668 TIMP2P16035 220 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 HK1P19367 917 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 PRLHRP49683 370 aa13.99□□□□□ -0.17
TCOF1-201ENST00000323668 MRPL58Q14197 206 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms