RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CENPOQ9BU64 300 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 C6orf62Q9GZU0 229 aaPredicted RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 PLEKHM1Q9Y4G2 1056 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 UGT2A1Q9Y4X1 527 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 PEX16Q9Y5Y5 336 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 KIAA0100Q14667 2235 aaKnown RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 M0R3H8 397 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 PLRG1O43660 514 aaKnown RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 ERAL1O75616 437 aaKnown RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 UPK1BO75841 260 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 LGI1O95970 557 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 SOX6P35712 828 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 IGFALSP35858 605 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 PRKCDQ05655 676 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 PIN1Q13526 163 aaPredicted RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 TPRG1LQ5T0D9 272 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 MFSD4BQ5TF39 518 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 TRIM69Q86WT6 500 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 C7orf61Q8IZ16 206 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 MFSD9Q8NBP5 474 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 NR4A3Q92570 626 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 WFDC6Q9BQY6 131 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 TAPBPLQ9BX59 468 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 PINK1Q9BXM7 581 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 ROGDIQ9GZN7 287 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 GIMAP4Q9NUV9 329 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 CHCHD3Q9NX63 227 aaKnown RBP21.09■□□□□ 0.97
PNKP-201ENST00000322344 FBXL12Q9NXK8 326 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 MOSPD1Q9UJG1 213 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 CFL2Q9Y281 166 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 ATG4BQ9Y4P1 393 aa21.09■□□□□ 0.97
PNKP-201ENST00000322344 OR52A4PA6NMU1 304 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 SCG5P05408 212 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 ADRA2AP08913 450 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 CSNK2A2P19784 350 aaPredicted RBP21.08■□□□□ 0.97
PNKP-201ENST00000322344 TNFRSF4P43489 277 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 DGKEP52429 567 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 PRKAG1P54619 331 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 GPR19Q15760 415 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 KIAA1211LQ6NV74 962 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 ATCAYQ86WG3 371 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 SNX29P2Q8IUI4 249 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 FAM131CQ96AQ9 280 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 CDCA3Q99618 268 aaPredicted RBP21.08■□□□□ 0.97
PNKP-201ENST00000322344 APOOQ9BUR5 198 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 KIR3DX1Q9H7L2 352 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 KCNK12Q9HB15 430 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 SNX7Q9UNH6 387 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 PCDHGA4Q9Y5G9 962 aa21.08■□□□□ 0.97
PNKP-201ENST00000322344 ARHGAP33O14559 1287 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 RNGTTO60942 597 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 PRKRAO75569 313 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 AIFM1O95831 613 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 CHRM4P08173 479 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 PRR5P85299 388 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 TGM3Q08188 693 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 LRRC32Q14392 662 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 SLC25A30Q5SVS4 291 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 AGAP7PQ5VUJ5 663 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 SLC48A1Q6P1K1 146 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 OR14C36Q8NHC7 312 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 CNRIP1Q96F85 164 aaPredicted RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 SCARF2Q96GP6 870 aaPredicted RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 TRNT1Q96Q11 434 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 POLDIP3Q9BY77 421 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 LMAN2LQ9H0V9 348 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 DNAJC27Q9NZQ0 273 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 CES1P1Q9UKY3 287 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 COLEC10Q9Y6Z7 277 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 GLOD5A6NK44 160 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 C4orf51C9J302 202 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 PGRMC2O15173 223 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 EMC8O43402 210 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 TP53P04637 393 aaPredicted RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 HMGN2P05204 90 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 IGFBP1P08833 259 aaPredicted RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 GSTM3P21266 225 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 GDI1P31150 447 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 STXBP1P61764 594 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 LASP1Q14847 261 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 GDPGP1Q6ZNW5 385 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 FAM20CQ8IXL6 584 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 FAM26EQ8N5C1 309 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 MND1Q9BWT6 205 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 SP140LQ9H930 580 aa21.07■□□□□ 0.96
PNKP-201ENST00000322344 LYARQ9NX58 379 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 LSM2Q9Y333 95 aaKnown RBP21.07■□□□□ 0.96
PNKP-201ENST00000322344 CKAP5Q14008 2032 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 PRR23AA6NEV1 266 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 SYT5O00445 386 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 ASNA1O43681 348 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 KIAA0513O60268 411 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 F3P13726 295 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 PEBP1P30086 187 aaKnown RBP21.06■□□□□ 0.96
PNKP-201ENST00000322344 MPIP34949 423 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 FEN1P39748 380 aaKnown RBP21.06■□□□□ 0.96
PNKP-201ENST00000322344 ZNF91Q05481 1191 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 FUT5Q11128 374 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 PPP2R2DQ66LE6 453 aa21.06■□□□□ 0.96
PNKP-201ENST00000322344 ZNF425Q6IV72 752 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms